Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g0142 ATGAAACTCTCTTTCTCTCTTTCTTCCTCAAATTCCAAGCCAGTTTCTAGGAAGCCAAACGTCAAACGGTCGGATGACGACGCGCCCCGACACGAGTACGTCACTGAATTCGACGCATCCAAAACCCTAGCAGATACTCAAACGAAGAGACTCATCGTTCCGCCGAAGGAGAACGAATGGAGACCAGAGAAGAAGATGAAAAACCTCGATCTTCCCCTCCAATCGACGACCGAATCCACCGATATCCGCTTCGAGCTTGAGTCATCCGATGCTGCCGCGGGGGATTCCAGCGTGTCGTACGGTTTGAATATCAGGGAGAACTCTAAGTCTGAAAATGAAGTTGCTGCTGCGAGTCATCCTGATGAATCGGTTGAGGCAACGTTGTTGAAGAAATTGAAGCAAGATCTAAGAAGGTTACCGGACGATCAGACGCTGGAGGACTTTGCTGAAGTTCCCGTTGAGGGTTTTGGCGCCGCTTTGCTCGCCGGCTACGGATGGACCGAAGGGAGAGGGATCGGTAGAAACGCGAAGGAAGATGTGAAAATTGTTGAGTACAATAGAAGCTTCGCCAAGCAAGGGTTCGCCTTTTTCAGCTCAGCGCAAAAGGAAAATTCGGATTCTTCTGGCAAAATTCGAGCGAATAACGCTGCTGAGTCGAAGGAAGATGAGAATTTGAAGAAGTCGAAAGACGAAAGAAGAAGAGATGAAAAGAGGGATTCTTTGACCACTCATCGAGAAAGGAGAGAAAAGGAGGATAAAAGGAGGAGAGAAGAGGGGCCAAGGGGCGAGAGATTAAAACACGAAAATGGATTGTCCAAGAAATCGAGTAGCAGAAGGGAAGAAGAGAGGAGTAGCAGAAGAGAAGAAGAGAGGACTAGTCGAAGAGAAGTAGGGAAGATAACGCCGTGGCTTACTAGTCATATTCGGGTTAGAGTAATTAGCAAGGATTTCAAAGGAGGAAGGTTCTATTTGAAGAAGGCCGAGATCTTGGATGTTGTTGGACCAACAACATGTGATATTTCCATGGATGAGAGTAGGGAGCTGATCCAAGGGGTTGATCAAGAGCTCTTGGAGACTGCCCTTCCCCGTCGTGGAGGTCCTGTTCTTGTTTTGTTTGGCAAGCATAAGGGTGCGTATGGAAGCCTGGTGGAGAGGGATTCGGAGCAAGAAACTGGTGTTGTTCGGGACGCTGACAGCCATGCTTTACTCAATGTGCGCCTGGAACAGATTGCTGAGTATGTTGGAGACCCAAGCTATATTGGATACTGA 1269 0.4815 MKLSFSLSSSNSKPVSRKPNVKRSDDDAPRHEYVTEFDASKTLADTQTKRLIVPPKENEWRPEKKMKNLDLPLQSTTESTDIRFELESSDAAAGDSSVSYGLNIRENSKSENEVAAASHPDESVEATLLKKLKQDLRRLPDDQTLEDFAEVPVEGFGAALLAGYGWTEGRGIGRNAKEDVKIVEYNRSFAKQGFAFFSSAQKENSDSSGKIRANNAAESKEDENLKKSKDERRRDEKRDSLTTHRERREKEDKRRREEGPRGERLKHENGLSKKSSSRREEERSSRREEERTSRREVGKITPWLTSHIRVRVISKDFKGGRFYLKKAEILDVVGPTTCDISMDESRELIQGVDQELLETALPRRGGPVLVLFGKHKGAYGSLVERDSEQETGVVRDADSHALLNVRLEQIAEYVGDPSYIGY* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g0142 422 PANTHER G PATCH AND KOW-CONTAINING 212 419 IPR045166 GO:0000398
Vvi9g0142 422 MobiDBLite consensus disorder prediction 199 296 - -
Vvi9g0142 422 MobiDBLite consensus disorder prediction 54 77 - -
Vvi9g0142 422 ProSiteProfiles G-patch domain profile. 153 199 IPR000467 GO:0003676
Vvi9g0142 422 MobiDBLite consensus disorder prediction 1 31 - -
Vvi9g0142 422 MobiDBLite consensus disorder prediction 1 17 - -
Vvi9g0142 422 Pfam G-patch domain 140 191 IPR026822 -
Vvi9g0142 422 MobiDBLite consensus disorder prediction 215 296 - -
Vvi9g0142 422 Gene3D - 307 361 - -
Vvi9g0142 422 MobiDBLite consensus disorder prediction 54 68 - -
Vvi9g0142 422 MobiDBLite consensus disorder prediction 199 214 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi9g0142 303 389 C2H2 Transcription Factor Family AT1G55460 33.333 2.50e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g0142 K13101 - vvi:100248106 737.258