Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g0132 ATGTTGACGTGCATAGCTTGTTCCAAGCAGGTGAGTGGTAGATCTCTCCATGAACAGGAGGAGGGAGAGGGAGAGGCTGTTGCAACTCCAAGCACCAAGCACGCCATCAAGGCCCTTACTGCTCAGATCAAGGACATGGCGTTGAAGGCTTCCGGGGCGTACAGAAACTGCAAGCCTTGTTCTGGGTCATCGGGGCAAAACCAGGACCGGAACTATGCCGATTCCGAGTCCGCGTCGGACTCGGCGAGGTTCCATTGCTCGTACCGTAGAACCGGCAGCTCGAGCTCCACGCCCAGGCTGTTGGGGAAGGAAATGGAGGCGAGATCGAAACGGCTTTCTAGCGGAGAAGGCACGCCGGCCTCGGTCAGCGGCCGGGCGGAGTCGGTTGTGTTTATGGAGGAAGATGAGCCTAAGGAGTGGATTGCCCAAGTGGAGCCTGGTGTCCTCATCACTTTTGTTTCCATGCCTCAGGGTGGAAACGATCTCAAGCGGATTCGATTCAGTCGTGAGATCTTTAACAAATGGCAAGCCCAAAGGTGGTGGGCAGAGAACTATGACAAAGTCATGGAATTATACAATGTTCAGAGGTTCAACCGCCAAGCTGTCCCCCTTCCAACACCGCCAAGATCTGAAGATGAGAGCTCGAGGATGGAATCTATACAGAACAGCCCTGTGACACCGCCACTGAGCAAAGAACGCTTACCCCGCAACTTCCACCACCGCCCAACAGGAATGGGTTACTCTTCATCCGATTCACTTGACCACCACCCTTTACAATCCCGACATTACTATGACTCGGCTGGCCTTGCTTCAACACCAAAACTCTCCAGCATCAGCGGGGCAAAGACCGAGACATCATCAATAGATGCTTCGGTAAGGACTAGTTCATCGAGAGAGGCAGACCGCTCAGGAGAGCTCTCCATAAGCAACGCCAGTGATATGGAGACTGAATGGGTTGAGCAGGACGAGCCAGGAGTCTACATCACCATCAGAGCATTGCCAGATGGCACTCGGGAGCTCAGACGTGTCCGATTCAGCCGAGAAAGGTTTGGGGAAATGCACGCGAGGCTGTGGTGGGAAGAGAACCGAGCCAGGATACAAGAACAATACTTGTGA 1116 0.5394 MLTCIACSKQVSGRSLHEQEEGEGEAVATPSTKHAIKALTAQIKDMALKASGAYRNCKPCSGSSGQNQDRNYADSESASDSARFHCSYRRTGSSSSTPRLLGKEMEARSKRLSSGEGTPASVSGRAESVVFMEEDEPKEWIAQVEPGVLITFVSMPQGGNDLKRIRFSREIFNKWQAQRWWAENYDKVMELYNVQRFNRQAVPLPTPPRSEDESSRMESIQNSPVTPPLSKERLPRNFHHRPTGMGYSSSDSLDHHPLQSRHYYDSAGLASTPKLSSISGAKTETSSIDASVRTSSSREADRSGELSISNASDMETEWVEQDEPGVYITIRALPDGTRELRRVRFSRERFGEMHARLWWEENRARIQEQYL* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g0132 371 ProSiteProfiles BRX domain profile. 138 193 IPR013591 -
Vvi9g0132 371 ProSiteProfiles BRX domain profile. 316 371 IPR013591 -
Vvi9g0132 371 Pfam Transcription factor BRX N-terminal domain 25 60 IPR027988 -
Vvi9g0132 371 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 371 IPR044532 -
Vvi9g0132 371 MobiDBLite consensus disorder prediction 84 122 - -
Vvi9g0132 371 MobiDBLite consensus disorder prediction 275 312 - -
Vvi9g0132 371 MobiDBLite consensus disorder prediction 84 100 - -
Vvi9g0132 371 MobiDBLite consensus disorder prediction 201 258 - -
Vvi9g0132 371 Pfam Transcription factor regulating root and shoot growth via Pin3 315 370 IPR013591 -
Vvi9g0132 371 Pfam Transcription factor regulating root and shoot growth via Pin3 138 192 IPR013591 -
Vvi9g0132 371 MobiDBLite consensus disorder prediction 275 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi9g0132 Vvi-Chr9 1317725 1323356 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi9g0132 1 371 Major Intrinsic Protein MIP AT1G31880 48.947 1.42e-105 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g0132 - - vvi:100251503 739.569