Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g0084 ATGAAAGAGTTCAATAGTTTGAACCGTACCAGACAACCCCAATTTCGTGCAATTTTGAATGGATTATGTGCCATAGTCCTATTGTTCTTCTTCTACAACCGGGAAGATATTCTGAGGAATCCTCTCCTCAGGCAATCATCTTCAACTTTTGATAAACCCTGGAGCTCAAGAGATGGCTTTCACGATCAGCTGAATGGAATGGTGGTAATTCATCGCCGCACTGGTGAAATCGGTGTTAATTCATCGGGTTTGATTGAAGGGTCTGATGATAACAATTTGAGTAAAAGCGATCCGGCCTCGTGTTCTGGATTAGTTGATCATGAGGGTTTTGCTAGCAGATGCGAGTTCTTGAAAGCACACCCGCATTGTTCTTCAGGAGGGTTCTTTGATTACATAAGATTTTTCTATTGTACTTGTGAGAAATTTAGATTCTTGGGTTATGTGATGTTGGGAATTTGGCTTGCTACGTTATTTTATCTATTGGGTAACACTGCAGCAGACTACTTCTGCTGTTCGTTAGAGAAGCTCTCAAATCTTTTGAGGCTGCCTCCCACAGTTGCTGGGGTTGCACTCCTTCCACTCGGAAATGGAGCACCTGATGTGTTTGCAAGTATTGCTGCTTTTGTGGGTAGAGACACTGGTGAGGTTGGACTTAATAGTGTGCTCGGTGGGGCAGTGTTTGTTACTTGTATTGTTGCTGGGACTGTTTCTTTATGTGTTGCCAACGAGAGAGTTCAGATTGATCGGAGATGCTTCATTAGGGATATATGTTTCTTCCTATTTACGCTCATTTCTCTTTTAGTGATTTTACTTGTTGGTAAGGTGAGTGTCGTGGGAGCAATTGTGTTTGTTTCAATTTATGGGGTTTATGCTTTTGCTGTTGCTGCGAATGAGATTTTGAGGAAACATGCACGGAGGTTGAAATTGGATGTCATTACACCTTTGATTCCTGTCAAAGGAAGTATCTTCTCTCAAGAAGGTGAAGAGGATGATTCTATGTACAGCCCTCTGCTTGATATCGAGACTGAAAGTGATCAGCCCCAACTCCATGCTTCCTTGCCACAGTGGATGTGGGCTTCAAATGTGGCGATATATTCAAACCAGGCAATAAAGGGTAGTATGGCAGATGGTGAAAGACATTTGTGGGGCTGGACTGATGAGGGCATGGAAAACAACCAGCCATTGTTTTCATTCTCTAAGTTTGTTTCACTGGTGGAGATGCCCTTGACAGTGCCAAGGCGGTTAACAATCCCTATAGTTGAGGAAGAAAGATGGTCAAGGGCATATGCTGTAGCCAGTGCTTCATTGGCTCCTGTTCTTCTTGCATTTTTGTGGAATTCCCAAGACGATGTGAGTTCTCAAGGCATAAACGCCGCATATCTTGTTGGTGTTATGGTTGGTTGTAATCTTGGCATTCTTGCATATCGTTACACTGTATCTGATCAGCCACCTCAGAGGTTCTTAATTCTGTGGGTTTTGGGAGGATTTATAATGAGTATCATCTGGTTCTACATAATTGCAAGTGAGCTTGTTGCTCTGTTGGTGGGATTTGGTGTTATTTTTGGGATTAATCCATCTCTCCTTGGATTAACTGTATTGGCATGGGGTAACTCAATGGGTGATTTGATGTCAAATGTTGCACTGGCAATGAATGGTGGGGATGGTGTGCAGATTGCCTTGTCTGGGTGCTATGCGGGTCCTATGTTCAACACTCTCATTGGTTTGGGGGTCTCGATGCTGCTAGGAGCCTGTTCAAAGAGACCTGGTCCATACATAGTTCCACAAGACAGTAGCTTGTTTTATACTTTGGGCTTTCTCATATCAGGACTAATCTGGGCACTTGTGGTATTACCTCGAAACGACATGCGTCCTAGCAAGACATTAGGCGTGGGCCTTATAACCCTCTATATGATATTTCTCACTGTTAGAGTGAGCACGGCTATGGAGTTAATATCAATTGCTGGTCTAAGTTGA 1974 0.4326 MKEFNSLNRTRQPQFRAILNGLCAIVLLFFFYNREDILRNPLLRQSSSTFDKPWSSRDGFHDQLNGMVVIHRRTGEIGVNSSGLIEGSDDNNLSKSDPASCSGLVDHEGFASRCEFLKAHPHCSSGGFFDYIRFFYCTCEKFRFLGYVMLGIWLATLFYLLGNTAADYFCCSLEKLSNLLRLPPTVAGVALLPLGNGAPDVFASIAAFVGRDTGEVGLNSVLGGAVFVTCIVAGTVSLCVANERVQIDRRCFIRDICFFLFTLISLLVILLVGKVSVVGAIVFVSIYGVYAFAVAANEILRKHARRLKLDVITPLIPVKGSIFSQEGEEDDSMYSPLLDIETESDQPQLHASLPQWMWASNVAIYSNQAIKGSMADGERHLWGWTDEGMENNQPLFSFSKFVSLVEMPLTVPRRLTIPIVEEERWSRAYAVASASLAPVLLAFLWNSQDDVSSQGINAAYLVGVMVGCNLGILAYRYTVSDQPPQRFLILWVLGGFIMSIIWFYIIASELVALLVGFGVIFGINPSLLGLTVLAWGNSMGDLMSNVALAMNGGDGVQIALSGCYAGPMFNTLIGLGVSMLLGACSKRPGPYIVPQDSSLFYTLGFLISGLIWALVVLPRNDMRPSKTLGVGLITLYMIFLTVRVSTAMELISIAGLS* 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g0084 657 Gene3D - 182 313 IPR044880 -
Vvi9g0084 657 Gene3D - 432 645 IPR044880 -
Vvi9g0084 657 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 18 651 - -
Vvi9g0084 657 FunFam Cation/calcium exchanger 5 429 645 - -
Vvi9g0084 657 Pfam Sodium/calcium exchanger protein 492 643 IPR004837 GO:0016020|GO:0055085
Vvi9g0084 657 Pfam Sodium/calcium exchanger protein 152 293 IPR004837 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi9g0084 Vvi-Chr9 761335 763308 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi9g0084 89 644 Antiporters AT5G17850 41.429 8.73e-129 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g0084 K13754 - vvi:100256701 1282.7