Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g0073 ATGGAACCGCCGGAAAGTATTACGTTGGATGCTGCGGAGAAGATAATCTTGCGGTGGGACTCGACGGCGTCGGAGGAGACGAGAGATCGGTTGATCTTCGAAGGCGATCGGCGGGAGGTGGATCAGTATTTGCAGGCCGTGGATGAAATCCAGCGGTCGATGTCGGCGGCGACGATTTCCGACGGTGACTGTAAAGTGAACAGCACTATCCAGATCGCCATGGCGAGGCTGGAGGATGAGTTTCGGAGCATTCTGATCAGCAACACCAGTCCGCTGGAGACTGATTCGCTTATCGATTCAAGTTTTTCGACTCACTCGAGTTTGATAACCGAACACAAGTACCCGGAGGATGAGCGTGTGCTGGGGCAAGTCGGAGAATCACCAAAAGCAGGTGAGTCGAGTTCGAGAGCGAGCGCGAGTTATCGATCTACGAATAGTATTCGCGAGCTGGATCTGATTCCAGCTGAAGCAATCGACGATCTTCGATGCATAGCCGAGAGGATGATCTCTGCCGGATATCTCCGCGAGTGCGTTCAGGTGTACGGGAGCGTACGGAAGTCAGCTGTGGACTCGAGCTTTCGACGGCTCGGTGTCGAGAATCTGAGCATCGGCGATATCCAACGGCGGGAGTGGGATGTGTTGGAGGTGAAGATCAGGCGTTGGATAAGAGCCGCTAAAGTGTGCGTGAGGATTCTGTTTGCTAGCGAAAAGAGGCTTTGTGAGCAAATCTTCAAAGGTCTAGACACCGCTATCGATGATGCTTGCTTCATAGAAACTGTTAAAGGTCCAGCAATTCAACTCTTTAAATTCGCTGAAGCGATAAGCATAAGTCGGAGAACGCCGGAGAAGTTGTTCAAGATGCTGGACCTTCACGATGCTTTATTGGACCTGTTACCGGATATTGATGCCGTTTTTGAATCAGAATTGTCAGAATCTATTCGAATTCAGGCAGCTGAGATCCTATCACGCTTGGCGGAGGCAGCCAGAGGGATATTATCGGAATTTGAGAACGCTGTGCTCTCTGAGCCTTCGAAGGTTCCGGTTCCGGGTGGAACAATTCACCCCTTGACTAGATATGTGATGAATTATATCAATTTGATATCTGATTACAAGCAAACCCTCATTGAGCTTATAGTATCAAAGCCCTCAACCGGGTCAAGATACTCCGGCGACCAGACTATGCCAGATATGGATTTTGCAGAGTTTGAGGGGCGAACTCCCTTGGCGCTTCATTTGATTTGGATTATTGTAATTTTGCAATTCAATGTGGAGGGGAAGTCCAAGTGCTACAGAGATAACGCTTTGGCTCATTTGTTCATTATGAACAATGTTCACTACATTGTTCAGAAGGCCAAAGGGTCAGAGGAACTGCGGGAGATTATTGGTGATGATTACTTAAAGAAGTTAACATGGAAATACCAACAGGCGGCTACTAGCTACCAGAGAACAACTTGGGTGAGGGTGCTGTATTGTTTGAGGGATGAGGGGTTGCATGTGAGTGGAAGTTTTTCCTCTGGGGTCTCAAAGAGTGCTTTGAGAGAGAGGTTCAAGGCCTTCAATGCTATGTTTGAGGAGGTTCATAGGACCCAGGCAATGTGGCATGTGCCAGATTCTCAGCTCCGGGAGGAGCTTCGGATATCTATAACAGAGAAGTTGCTCCCAGCTTATAGGTCATTTCTTGGGCGGTTCAGGAGCCATATAGAGAGTGGAAGGCACCCAGAGAATTACATCAAGTACTCAGCAGACGATTTAGAGACTGCTGTCTTGGACTTCTTTGAGGGATACCCGGTCTCACAGCACTTGAGAAGGAGATCTCAGTGA 1821 0.4876 MEPPESITLDAAEKIILRWDSTASEETRDRLIFEGDRREVDQYLQAVDEIQRSMSAATISDGDCKVNSTIQIAMARLEDEFRSILISNTSPLETDSLIDSSFSTHSSLITEHKYPEDERVLGQVGESPKAGESSSRASASYRSTNSIRELDLIPAEAIDDLRCIAERMISAGYLRECVQVYGSVRKSAVDSSFRRLGVENLSIGDIQRREWDVLEVKIRRWIRAAKVCVRILFASEKRLCEQIFKGLDTAIDDACFIETVKGPAIQLFKFAEAISISRRTPEKLFKMLDLHDALLDLLPDIDAVFESELSESIRIQAAEILSRLAEAARGILSEFENAVLSEPSKVPVPGGTIHPLTRYVMNYINLISDYKQTLIELIVSKPSTGSRYSGDQTMPDMDFAEFEGRTPLALHLIWIIVILQFNVEGKSKCYRDNALAHLFIMNNVHYIVQKAKGSEELREIIGDDYLKKLTWKYQQAATSYQRTTWVRVLYCLRDEGLHVSGSFSSGVSKSALRERFKAFNAMFEEVHRTQAMWHVPDSQLREELRISITEKLLPAYRSFLGRFRSHIESGRHPENYIKYSADDLETAVLDFFEGYPVSQHLRRRSQ* 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g0073 606 PANTHER EXOCYST COMPLEX PROTEIN EXO70 8 594 IPR004140 GO:0000145|GO:0006887
Vvi9g0073 606 SUPERFAMILY Cullin repeat-like 13 593 IPR016159 -
Vvi9g0073 606 FunFam Exocyst subunit Exo70 family protein 26 600 - -
Vvi9g0073 606 Gene3D Exocyst complex component Exo70 15 602 - -
Vvi9g0073 606 Pfam Exo70 exocyst complex subunit 220 588 IPR046364 GO:0000145|GO:0005546|GO:0006887
Vvi9g0073 606 ProSiteProfiles Sox C-terminal domain profile. 1 116 IPR021934 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi9g0073 Vvi-Chr9 662189 664024 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi9g0073 9 606 EXO70 exocyst subunit family AT1G72470 66.721 0.0 807
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g0073 K07195 - vvi:100254947 1149.04