Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g0071 ATGTCGAATTCACCGGAGTTCTCTGATTTCGCCGGCCGGAAGTCCGGGAAGTTGCCGGACAGGTCGAATTTCTCGCAGACCTGTAATCTCTTGAGCCAGTTCCTCAAGGAAAAGGGAAGATTCGGGGATCTCAGCCTCGGCATGGCCGGGAAATCTGAGACCAAAGGGAGGCCTGAATCATTCAAATCATCAACCATGTCATTTGACCTGTTAAACAAGGATAAATCTAGCGAGGCTTCGGGGCAAAACGTTGGTGGATCCTCCAATTTGAAATCCAGTGATTTCTACCCTCAGTTTGCTGGTTTTGGTTCCCTTGCTTCCATTGACGAAGCCATTAATATGGCTGATTTCAGGAAATCGGCAACAACAGAGTCGGAAACTTCTCAGATGACAATATTCTACGCCGGCCAAGTGCTGGTATTCAATGATTTTCCGGCCGAGAAGGCCAGAGAAGTCATGCTATTAGCCGCCAAGGGAACCCCCCAAAATACTAGCGGCTTCCTCTCCACTTCTGGCCCTGAAAAAATCAATACAGGCAGCTCAACCGCCCCTAGCCCTAGCATCCCCGCCTCGCCGGCCACCACCCCGAACCCTCAAGCCCTCAGCTCTGGTACTTTCAGCATTCCTGCCTCGCCTGCAGCCACCCCAAACCCTCAAGCTCCTCTTGGCTCTGAACTGCCAATTGCAAGGAGAAACTCACTTCACCGGTTCTTGGAGAAGAGAAAAGATCGGGTCAATTCGAAAGCACCATACCAAGTAAACAATCCATCCAGACCTTCTCCAAAGCCTGAAGAGGACACCAACCCAAAGCTCAACAAAGATGAAGGTCAATCATCAAAGCAACTTGATCTTAGATTGTAG 861 0.5006 MSNSPEFSDFAGRKSGKLPDRSNFSQTCNLLSQFLKEKGRFGDLSLGMAGKSETKGRPESFKSSTMSFDLLNKDKSSEASGQNVGGSSNLKSSDFYPQFAGFGSLASIDEAINMADFRKSATTESETSQMTIFYAGQVLVFNDFPAEKAREVMLLAAKGTPQNTSGFLSTSGPEKINTGSSTAPSPSIPASPATTPNPQALSSGTFSIPASPAATPNPQAPLGSELPIARRNSLHRFLEKRKDRVNSKAPYQVNNPSRPSPKPEEDTNPKLNKDEGQSSKQLDLRL* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g0071 286 MobiDBLite consensus disorder prediction 232 247 - -
Vvi9g0071 286 MobiDBLite consensus disorder prediction 263 286 - -
Vvi9g0071 286 MobiDBLite consensus disorder prediction 161 286 - -
Vvi9g0071 286 MobiDBLite consensus disorder prediction 161 213 - -
Vvi9g0071 286 Pfam tify domain 125 157 IPR010399 -
Vvi9g0071 286 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 15 263 IPR040390 -
Vvi9g0071 286 SMART tify_2 123 158 IPR010399 -
Vvi9g0071 286 ProSiteProfiles Tify domain profile. 123 158 IPR010399 -
Vvi9g0071 286 Pfam Jas motif 227 252 IPR018467 -
Vvi9g0071 286 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi9g0071 Vvi-Chr9 647406 649133 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi9g0071 1 268 Tify Gene Family AT1G19180 42.857 1.43e-47 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Vvi9g0071 tify 4.6e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g0071 K13464 - vvi:100260039 545.043