Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g0050 ATGGCAGACATGGACGTAAATAGAGAAAAGAAACAAGGACAATCTGAGAATGGAGATCATGACCAGCAAACGCCAAACAAGGCGCAGCTGGTTTTGCCTCAAATATCCCAGCTGGTATCGAACCCTTGGGCCCCTCACTGGCCCTCACTTTTATATACGAAACTTCTGCTTCCTCCCTTCTCCACAACCCCCCACACCTTCACCTTCAACAAAAATATGGCCAAAGGTGGGAAGCTAACCATCACCAAGCTCAGGGCCGCAGTCCTCAAGAAGTGGCCCTCCATGGGCAAGCTCGGGCGCTCCACCAGCAGCGCCATAGCCGCCGTGGACGGTGGCGACGGGGAAGGGCTGAGGGCGGTCTACGTGGGCAAGTCGCGGCGGCGGTACCTGGTGCGGCCGGAGGTGGCGGACCACCCCGTGTTTCAGGAGCTGGCGGAGAGGTCCACCGACAGCGGAGGCGGCGACGGGGTGACGGTCTCGTGTGAGGTGGTTCTGTTCGAGCACTTGCTGTGGATGCTGGAAAATGGCGGCGCGGAGGTGGAGTCCATGGACGAGCTCGTGGAGTTTTACAGCTGCTGA 579 0.5907 MADMDVNREKKQGQSENGDHDQQTPNKAQLVLPQISQLVSNPWAPHWPSLLYTKLLLPPFSTTPHTFTFNKNMAKGGKLTITKLRAAVLKKWPSMGKLGRSTSSAIAAVDGGDGEGLRAVYVGKSRRRYLVRPEVADHPVFQELAERSTDSGGGDGVTVSCEVVLFEHLLWMLENGGAEVESMDELVEFYSC* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g0050 192 PANTHER EXPRESSED PROTEIN 109 191 - -
Vvi9g0050 192 MobiDBLite consensus disorder prediction 1 17 - -
Vvi9g0050 192 MobiDBLite consensus disorder prediction 1 25 - -
Vvi9g0050 192 Pfam Auxin responsive protein 108 173 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi9g0050 Vvi-Chr9 445796 446374 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi9g0050 73 173 Calmodulin-binding Proteins AT4G34750 29.524 1.11e-08 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g0050 - - vvi:100261740 380.948