Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi9g0034 ATGGCCATCTCTCCACTTCTCTTCCTCTCCTTATTCTTCTTCTTCTCATTTCTCCCATTCCTTCCTTTCTATTCAGCTTCAGCCTCAGCTCTTCATAGGACTTACATTGTCTTCGTCCAACACGACGCCAAGCCCTCTGTTTTCCCAACCCACAAGCACTGGTACGACTCGTCCCTCAGATCCCTATCCTCCACCATTCAAACCACGTCTCATTCCGAAACTAGTAGGATTCTCCACACCTACGAGACTGTGTTTCATGGGTTTTCTGCAAAGCTATCTCCTTTGGAGGCTGACCAGCTCCAAAAGGTGTCTGGTATTGTTGGGGTTATTCCTGAGCAGGTCAGGGAATTGCAGACCACTAGGTCTCCTCAGTTTCTGGGGTTGAAGACGACGGATAGTGCTGGGTTGTTGAAGGAGTCTGATTTTGGGTCCGATCTGGTGATCGGAGTTATTGATACTGGGATCTGGCCGGAGAGGCAGAGTTTCAATGACAGAAATTTGGGTCCAGTTCCGGCGAAGTGGAAGGGGGAGTGTGTGGGTGGGAAGGATTTTCCGGCTACTTCGTGTAACCGGAAGTTGATCGGAGCGAGGTTCTTTTGTGGTGGGTACGAGGCTACAAATGGTAAGATGAACGAAACGTTGGAGTCCCGTTCGCCGCGGGACTCCGACGGGCACGGTACCCACACTGCGTCGATCGCCGCCGGGAGGTACGTGTTTCCGGCCTCCACTCTCGGCTACGCTCGTGGCGTCGCGGCGGGGATGGCTCCCAAAGCCCGCCTCGCCGCTTACAAGGTTTGCTGGAATGCTGGCTGCTACGACTCCGACATTCTCGCTGCGTTCGACGCCGCCGTCGCCGACGGAGCCGACGTCGTGTCCCTCAGCGTTGGTGGCGTCGTAGTCCCCTACTACCTCGATTCTATCGCCATCGGCGCCTTCGGAGCTTCCGACCACGGAGTGTTCGTTTCCGCCTCCGCCGGCAATGGAGGCCCCGGCGGCCTCACCGTCACTAATGTCGCACCCTGGGTCACAACCGTCGGCGCCGGAACAATGGATCGTGATTTCCCCGCCAACGTAAAGCTCGGAAACGGAAAGTTGATTCCGGGCGTAAGCGTCTATGGCGGACCTGGGTTGGCCCCTGGGCGGCTCTATCCTCTGATATACGCTGGAAGTGTAGGTGGCGATGGATACTCATCATCACTCTGCTTGGAAGGATCCTTAGATCCCAGTTTCGTAAAAGGAAAAATCGTATTATGTGACAGAGGAATCAATTCAAGAGCTACCAAAGGTGAAGTTGTGAGAAAAGCTGGTGGAATTGGAATGATACTCGCTAATGGTGTGTTCGACGGCGAAGGCCTGGTGGCTGACTGCCATGTCTTGCCGGCCACCGCCATCGGAGCATCCGGAGGTGATGAGATTCGGAAGTACATCACAGTGGCTTCCAAATCCAAGTCACCGCCCACCGCCACCATAATTTTTCGGGGAACCAGGCTAGGGGTCCGTCCAGCCCCTGTCGTGGCCTCATTCTCCGCCCGTGGCCCCAATCCAGAGTCACCGGAGATACTCAAGCCCGATGTCATTGCTCCAGGGCTGAACATCCTCGCAGCCTGGCCCGACCGAGTTGGCCCATCTGGGATTCCGTCTGACAAGCGCAGAACAGAGTTTAACATACTCTCTGGTACATCAATGGCGTGCCCACATATATCTGGTCTAGCTGCATTGCTGAAGGCTGCCCACCCAGAATGGAGCCCGGCAGCAATTCGATCAGCCTTGATGACAACCGCATACACAGAAGATAACCGGGGCGAGACAATGTTGGATGAAGCCACAGGGAATACCTCAACTGTAATGGATTTTGGAGCAGGCCATGTTCATCCTCAAAAGGCCATGGACCCTGGCCTAATCTATGACTTAACCTCCAATGATTACATCGACTTCCTCTGTAACTCAAATTACACTGTCACCAACATTCAGATGATCACCAGGAAGATGGCGGATTGCAGCAAGGCAAGGAAGGCCGGCCATGTTGGGAACTTGAATTATCCATCCATGTCTGCTGTTTTCCAGCAATATGGAAAGCACAAGTTCTCGACTCATTTCATACGAACCGTGACCAATGTTGGGGACCCCAATTCAGTATACCAAGTGACAGTGAAGCCCCCCACTGGAACACTGGTGACTGTACAGCCGGAAAAGCTTGTGTTCAGGAGGTTGGGGCAGAAGCTGAACTTCCTGGTGAGGGTGGAAGCCATGGCAGTTAAGCTCTCACCAGGAAGCACTAGTATAAAGAGTGGCTCTATAGTATGGGCAGATGGGAAGCACACTGTCACTAGTCCCATAGTTGTGACACTGGAGCAACCTCTGTAG 2364 0.5372 MAISPLLFLSLFFFFSFLPFLPFYSASASALHRTYIVFVQHDAKPSVFPTHKHWYDSSLRSLSSTIQTTSHSETSRILHTYETVFHGFSAKLSPLEADQLQKVSGIVGVIPEQVRELQTTRSPQFLGLKTTDSAGLLKESDFGSDLVIGVIDTGIWPERQSFNDRNLGPVPAKWKGECVGGKDFPATSCNRKLIGARFFCGGYEATNGKMNETLESRSPRDSDGHGTHTASIAAGRYVFPASTLGYARGVAAGMAPKARLAAYKVCWNAGCYDSDILAAFDAAVADGADVVSLSVGGVVVPYYLDSIAIGAFGASDHGVFVSASAGNGGPGGLTVTNVAPWVTTVGAGTMDRDFPANVKLGNGKLIPGVSVYGGPGLAPGRLYPLIYAGSVGGDGYSSSLCLEGSLDPSFVKGKIVLCDRGINSRATKGEVVRKAGGIGMILANGVFDGEGLVADCHVLPATAIGASGGDEIRKYITVASKSKSPPTATIIFRGTRLGVRPAPVVASFSARGPNPESPEILKPDVIAPGLNILAAWPDRVGPSGIPSDKRRTEFNILSGTSMACPHISGLAALLKAAHPEWSPAAIRSALMTTAYTEDNRGETMLDEATGNTSTVMDFGAGHVHPQKAMDPGLIYDLTSNDYIDFLCNSNYTVTNIQMITRKMADCSKARKAGHVGNLNYPSMSAVFQQYGKHKFSTHFIRTVTNVGDPNSVYQVTVKPPTGTLVTVQPEKLVFRRLGQKLNFLVRVEAMAVKLSPGSTSIKSGSIVWADGKHTVTSPIVVTLEQPL* 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi9g0034 787 FunFam Subtilisin-like protease SBT1.9 23 118 - -
Vvi9g0034 787 SUPERFAMILY Subtilisin-like 118 633 IPR036852 GO:0004252|GO:0006508
Vvi9g0034 787 Gene3D - 351 498 - -
Vvi9g0034 787 Pfam Fibronectin type-III domain 677 781 IPR041469 -
Vvi9g0034 787 CDD PA_subtilisin_like 357 490 - -
Vvi9g0034 787 ProSitePatterns Serine proteases, subtilase family, serine active site. 559 569 IPR023828 -
Vvi9g0034 787 PRINTS Subtilisin serine protease family (S8) signature 143 162 IPR015500 -
Vvi9g0034 787 PRINTS Subtilisin serine protease family (S8) signature 558 574 IPR015500 -
Vvi9g0034 787 PRINTS Subtilisin serine protease family (S8) signature 221 234 IPR015500 -
Vvi9g0034 787 Pfam PA domain 398 471 IPR003137 -
Vvi9g0034 787 CDD Peptidases_S8_3 116 595 IPR034197 -
Vvi9g0034 787 Pfam Peptidase inhibitor I9 34 117 IPR010259 -
Vvi9g0034 787 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 23 118 IPR037045 -
Vvi9g0034 787 ProSiteProfiles Serine proteases, subtilase domain profile. 122 629 - -
Vvi9g0034 787 FunFam Subtilisin-like protease SBT1.5 646 784 - -
Vvi9g0034 787 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 44 781 IPR045051 -
Vvi9g0034 787 Gene3D Peptidase S8/S53 domain 145 642 IPR036852 GO:0004252|GO:0006508
Vvi9g0034 787 FunFam Subtilisin-like protease SBT1.5 145 362 - -
Vvi9g0034 787 Gene3D - 646 783 - -
Vvi9g0034 787 Pfam Subtilase family 143 610 IPR000209 GO:0006508|GO:0008236
Vvi9g0034 787 FunFam subtilisin-like protease SBT1.5 351 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi9g0034 Vvi-Chr9 343607 345970 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi9g0034 34 787 Subtilisin-like Serine Gene Family AT3G14240 78.600 0.0 1231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi9g0034 - - vvi:100852502 1543.87