Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g1664 ATGGAGGGTTCTGCAACTACACATGATATGAATTTGGCTTCAAGAAAAGCCGAAGAAGCAGCTTGGAGGCGGTTCCAAGCTGCTGGATGGCTCGAGACCCTAGTCGGACCAATTGGGGTATCGACTCATCCGTCAGAACGAGAGTTCGTTTCTTGCTTGAGAAATGGTTTAATTTTATGCAATGCCATTAACAAGATCCATCCAGGATCAGTGCCCAAGATCGTGGAGAATCATTCATCTTCACAATCACTCACCTGGGAATCTCAGCCTTTGCCTGCCTATCAATACTTTGAGAACGTCCGGAACTTTCTGGTGGCTGTTGAAGAATTGAAGCTTCCTGCTTTTGAAGCTTCTGATCTTGAGAGGGATACTTTGGAGGCTGGCTCTGCAGCTAAGGTTGTTGATTGCATTTTAGTCCTTAAATCATACCACGAGTGGAAGCAGATGGGTGGAGGAAATGGATATTATAAGCATGTGAGATCCCCTATGGTTGTGCATTCAGCAAATAGGGTAAATTCAACAGCTTCTGCGGCAAATCCATCAGACTCCTGTAGGCGTTTGGATATGTCTGTTACACCTCCTTTGGACGGTGAAGCTCGGAAACTTGAAGATTTGATTGTCTCAGTATTTGCTGAATGCATGGTTGATGTGAAGGAAAACATTGATGATAACCTTCTTGATTCCTTTCGGAGTGGAAATCGGGTAATAAATCACTTCAATGATATATATAAAATGAAACCAATTTTTAAAGATCTTCTGCAAGAAGGAAGTGACTCAAATGTCCATTCGAAATCTACACCTCTTGAAAATTCATCTACAGATCTCAAGGCCTTGTTGTCAAGAACAAAGAGGGAATTCAAAGGGTTAGAGTCTCAATTGCAGAATGATCTGAAACAACTGGGAAATGTAGTTCAAGAGATGTCTGCTGCAGCTGTTGGGTATCAGAGGGTGGTGAAAGAGAACAGGAATCTGTACAACATGGTTCAGGATTTGAAAGGAAACATTCGAGTTTACTGCAGAATTAGGCCTGCCTTCAGTGTTGGAGCAAGAAGTACTATAGACTTCATTGGAGAGGATGGTTCGCTAGTGATAGTTGACCCATTGAAGCGCCAAAGAGATGGAAGGAGGGTTTTTCAATTTGACCGAGTGTTCGATCCAACTGCTACCCAAGATGCTGTATTTAAGGACACCCAACCTTTAATTAGGTCTGTGATGGATGGATACAATGTGTGCATCTTCGCCTATGGTCAAACTGGATCCGGCAAAACATATACTATGTGTGGTCCATCAGGTGGATCAACTAAGGACATGGGGATCAATTATCTAGCTCTTAATGATCTCTTCCAGATGTCTAATAAAAGAAAGGACATTATAACTTATGACATTTATGTTCAAATGGTTGAAATATACAATGAACAAGTACGTGATCTTCTTGCAGAAGATTCGTCAACAACAAAATATCCTTTCCTGATGGCTATTCGAAGCTGTACTAGCGAAAATGGCTTGAGTCTTCCTGATGCTACAGTGCATTCTGTAAAGTCCACAGCTGATGTTCTTAACCTTATGAAACTTGGTGAGCTGAATCGACACGTCAGTTCCACTGCAATCAACAACCGAAGTAGTCGTTCACACAGTGTCTTGACAATACATGTGCATGGTAATGATTTATCTGGAAGCATTCTTCGAAGTTGTCTACATCTGGTGGACCTTGCAGGAAGTGAAAGGGTGGACAAATCAGAAGTCACTGGAGATAGGCTCAAGGAGGCACAGTATATCAACAAGTCTCTATCTTGTTTAGGAGATGTGATCACAGCCTTGGCTCAGAAGAACTCCCACATCCCTTACAGAAACAGCAAACTCACACTACTCTTGCAAGACTCTTTAGGAGGCCATGCCAAAACATTAATGTTTGCTCATCTGAGCCCAGAAGATGATTCTTTTGGGGAAACAATCAGTACTCTGAAGTTTGCTCAGAGGGTTTCAACTGTCGAACTAGGCACTGCTCGTTTGAACAAAGAGAGCAGCAAGGTTATGGAACTCAAGGAACAGATTGAGAACCTCAAGAAGGCTTTGTCAAACAAGGAAGGTCACAGTATCATACCAAGTAAAGTGAATGAACCAAGACCTCCATCTGAGAAGCCAAAAGGAATGATTGACAGAACTCCTCCCCGGCCTCGAAGATTGAGCATTGAAAATTGCAGCAGCTTGAAGAAAGAGAAAGCAATGCATCCTGAAGAAAAAAAAGGATCAAAAACCCCTTCTATACGAACTCGTGCACGAAGATTAAGTTTGGAAGGTTCAAACCAAGGGAAGAAGGATCATTTGCTGGTGAAAATGTCTGAAGATGTAAGCAAGCTTCAACCTCTTGAAGCTTTTGGGCATTTCAGCACTGGCAGTTCCATGATGGAAGAGGAGGTATTTAATTATCAGAAAGCTCCAAAGAGTCCTGTAAGTTCCACTTACAAAAGCCGAGTTGCAAAAGCAGCAAGTAGAACACAGGTTGCACCATTTCAACTAACAAAGACGCCTGAGCCAGATAGAAAGGAGGTTCAGACTATGATGCAGAGTGACCTGAGTGTTTCTAAAGATTCTCAGATACCTAGCTTCATTAGTAGTGGGAATGGAAAAGGATCTCAAATAAGGAAATCACTTAGAACCATCGGAAAGCTGATTAATGGCTCTGAAAAAAGGAACCAACAGAAGTTAATGGAAGCAAGAACACCCATCAAGGGATCAAACAATGCCGAAGGTGGGAGGTCTCCACTCACTGCTAATGCAAGAGCAATGAGAAGGCAGTCACTAACCGGCATTCAGACATCCGGGCCCTGGAGATCATCTGTTATAGGGAAGTCATCTGACTCCTGTTCAAATGAAACAAGGAATGCCTAG 2889 0.4258 MEGSATTHDMNLASRKAEEAAWRRFQAAGWLETLVGPIGVSTHPSEREFVSCLRNGLILCNAINKIHPGSVPKIVENHSSSQSLTWESQPLPAYQYFENVRNFLVAVEELKLPAFEASDLERDTLEAGSAAKVVDCILVLKSYHEWKQMGGGNGYYKHVRSPMVVHSANRVNSTASAANPSDSCRRLDMSVTPPLDGEARKLEDLIVSVFAECMVDVKENIDDNLLDSFRSGNRVINHFNDIYKMKPIFKDLLQEGSDSNVHSKSTPLENSSTDLKALLSRTKREFKGLESQLQNDLKQLGNVVQEMSAAAVGYQRVVKENRNLYNMVQDLKGNIRVYCRIRPAFSVGARSTIDFIGEDGSLVIVDPLKRQRDGRRVFQFDRVFDPTATQDAVFKDTQPLIRSVMDGYNVCIFAYGQTGSGKTYTMCGPSGGSTKDMGINYLALNDLFQMSNKRKDIITYDIYVQMVEIYNEQVRDLLAEDSSTTKYPFLMAIRSCTSENGLSLPDATVHSVKSTADVLNLMKLGELNRHVSSTAINNRSSRSHSVLTIHVHGNDLSGSILRSCLHLVDLAGSERVDKSEVTGDRLKEAQYINKSLSCLGDVITALAQKNSHIPYRNSKLTLLLQDSLGGHAKTLMFAHLSPEDDSFGETISTLKFAQRVSTVELGTARLNKESSKVMELKEQIENLKKALSNKEGHSIIPSKVNEPRPPSEKPKGMIDRTPPRPRRLSIENCSSLKKEKAMHPEEKKGSKTPSIRTRARRLSLEGSNQGKKDHLLVKMSEDVSKLQPLEAFGHFSTGSSMMEEEVFNYQKAPKSPVSSTYKSRVAKAASRTQVAPFQLTKTPEPDRKEVQTMMQSDLSVSKDSQIPSFISSGNGKGSQIRKSLRTIGKLINGSEKRNQQKLMEARTPIKGSNNAEGGRSPLTANARAMRRQSLTGIQTSGPWRSSVIGKSSDSCSNETRNA* 963
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g1664 962 CDD CH_AtKIN14-like 23 142 - -
Vvi8g1664 962 Pfam Kinesin motor domain 369 662 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi8g1664 962 ProSiteProfiles Kinesin motor domain profile. 334 663 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi8g1664 962 SMART kinesin_4 332 671 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi8g1664 962 MobiDBLite consensus disorder prediction 935 962 - -
Vvi8g1664 962 Pfam Calponin homology (CH) domain 24 145 IPR001715 GO:0005515
Vvi8g1664 962 MobiDBLite consensus disorder prediction 708 753 - -
Vvi8g1664 962 Coils Coil 279 299 - -
Vvi8g1664 962 MobiDBLite consensus disorder prediction 693 768 - -
Vvi8g1664 962 FunFam Kinesin-like protein KIN-14A 276 665 - -
Vvi8g1664 962 PRINTS Kinesin heavy chain signature 534 551 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi8g1664 962 PRINTS Kinesin heavy chain signature 407 428 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi8g1664 962 PRINTS Kinesin heavy chain signature 613 634 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi8g1664 962 PRINTS Kinesin heavy chain signature 564 582 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi8g1664 962 FunFam Kinesin-like protein KIN-14L 9 172 - -
Vvi8g1664 962 Gene3D Kinesin motor domain 277 665 IPR036961 -
Vvi8g1664 962 Gene3D - 7 173 IPR036872 -
Vvi8g1664 962 SMART ch_5 23 143 IPR001715 GO:0005515
Vvi8g1664 962 ProSiteProfiles Calponin homology (CH) domain profile. 21 145 IPR001715 GO:0005515
Vvi8g1664 962 PANTHER KINESIN-LIKE PROTEIN KLP-3 28 849 IPR027640 GO:0003777|GO:0007018
Vvi8g1664 962 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 334 694 IPR027417 -
Vvi8g1664 962 MobiDBLite consensus disorder prediction 858 881 - -
Vvi8g1664 962 SUPERFAMILY Calponin-homology domain, CH-domain 22 158 IPR036872 -
Vvi8g1664 962 Coils Coil 670 697 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi8g1664 Vvi-Chr8 22170222 22180306 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi8g1664 244 663 Calmodulin-binding Proteins AT5G65930 37.762 5.31e-72 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g1664 K10406 - vvi:100246940 1828.53