Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g1597 ATGGAATCTTCACCAGAACAGATACCAGGAGAACATGAAGAGAAGCCCCAGATTGATCTGAATGAGTTTCTTCAGCAACTGGGAATGCCAAGAGATGAATGTCAGTCAGAAGGAAGCAATATGACAGAAAGTTTGGCAGCACCTGAATCTTCATTAAAAGATGACAATGAACTTGTGGGTTTTGCTGAGGAAAGTTTCAGCTTGGATGCACTGATCAAGATGTGTGGAATAGAGGATCATCAGGGAGCAGATGCCAGTAACTTCCAGGGTTATGGTCTGTATGAAGAGCCAGCTTTCCCTCCATACATCTGGAACGTCTGA 321 0.4393 MESSPEQIPGEHEEKPQIDLNEFLQQLGMPRDECQSEGSNMTESLAAPESSLKDDNELVGFAEESFSLDALIKMCGIEDHQGADASNFQGYGLYEEPAFPPYIWNV* 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g1597 106 MobiDBLite consensus disorder prediction 32 51 - -
Vvi8g1597 106 MobiDBLite consensus disorder prediction 32 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi8g1597 Vvi-Chr8 21514718 21515038 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi8g1597 10 105 AP2-EREBP Transcription Factor Family AT3G57600 39.394 1.75e-10 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g1597 - - vvi:100252184 174.096