Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g1555 ATGGTTGATGTCCAAGACTATATCATTCTCTTCCTCATTTGGCTCGTATCTGTCGTCGTGGTTCATGCCTTGTTCACCAAGTACCGGACCAGGGTGCGACGACCACCGGGCCCACTAGCCCTACCTATCATCGGACACTTCCACCTCCTCGGCTCAAAACCTCACCAATCCCTTCACAAGCTCTCGCTCCGCTATGGACCGCTATTTCAACTCTTCCTTGGTTCCATCCCTTGTGTGGTAGTTTCCTCTCCGGAGATGGCAAAAGAGTTTCTCCAAACCCATGATATTTCATTCTCCAACCGACCCAAACTCAGCAATGCTGATTACCTAACCTACGGCTCGGTTGATCTTGCCTTTTCTTCATATGGGCCCTATTGGAAATTCATGAAGAAACTTTGCATGACCAAACTTCTCGGCCTCCAAACACTAGAGAAATTTGTCCCAGTTATGAGAGAAGAGAGACATCTATTTTTGCAAACACTATTGGGAAAAGCTGAAGCAGGTGAGACAGTTGATGTTAAAGGAGAGATTATGAGGCTAACAAACAACTTAGTAACAAGAATTCTTCTGAGGCACAGGTGTTCTGGGAATGAGGATGATGCTAGCGAAGTGAGAGAGTTTATGAAAGAGATAGTACAGCTCACAGGCAGTTTTAACTTGGCAGATTTTATCTGGTTTTGTAAGAATTTGGATCTGCAAGGATTTAAGAAGAGAGTCAAAGAAGCTCGTGGAAGGTTTGATACAATGATGGAAAGGATTATGAAGGCTCATGAAGAAGAAAGGAGGAAGAAAAGGGATCCGAATAATGGAGGAGACACAGTGAATGACTTGCTTGATATTTTACTTGATATAATCGAAGATGAGAAAGAGGAGATGAGACTGACAAGAGAGAACGTCAAGGCCATCATCCTGAATATTTTTGGAGGGGGAACGGATACATCTGCTGCAGCAGCAGTATGGGCAGTAGCAGAGCTAATTAACCACCCAAACATTATGGAGAAAGCAAGACAAGAGATAGATTCTGTAGTGGGAAAGGATAGACTTGTGGAAGAATCAGATATCGCAAACCTTCCTTATCTTCAAGCCATTGTTAAGGAGACACTTAGGCTCCATCCTCCTGGTGCAGTGATCGCTAGAGAATCTATTGAAGATTGCACCATCAGAGGTTATGATATTCCTACAAAGACACAATTATTTGTTAACTTGTGGGCTATTGGAAGGGACCCAAATTACTGGGAGAACCCACTTGAGTTCTGGCCTGAGAGGTTCCTGAGAGAGGATGGGAGTTTAAAGAGTCAGTTGGATGTAAAGGGGCAACATTTTCATCTACTGCCATTTGGGAGTGGAAGGAGAATATGCCCTGGAATTTCACTAGCACTACAGGTTGTTCAGACAAGCTTGGCTGCTATGATTCAATGTTTTGAATGGAGGGTTGGTGGAGGAAATGGAAATGTTGATATGGAAGAGGGACCTGATGCAGCCCTCGCACACCCTTTGGTTTGTGTCCCAGTGGCCAGGTTGAATCCATTTCCAAATTATACAATGTAA 1548 0.4399 MVDVQDYIILFLIWLVSVVVVHALFTKYRTRVRRPPGPLALPIIGHFHLLGSKPHQSLHKLSLRYGPLFQLFLGSIPCVVVSSPEMAKEFLQTHDISFSNRPKLSNADYLTYGSVDLAFSSYGPYWKFMKKLCMTKLLGLQTLEKFVPVMREERHLFLQTLLGKAEAGETVDVKGEIMRLTNNLVTRILLRHRCSGNEDDASEVREFMKEIVQLTGSFNLADFIWFCKNLDLQGFKKRVKEARGRFDTMMERIMKAHEEERRKKRDPNNGGDTVNDLLDILLDIIEDEKEEMRLTRENVKAIILNIFGGGTDTSAAAAVWAVAELINHPNIMEKARQEIDSVVGKDRLVEESDIANLPYLQAIVKETLRLHPPGAVIARESIEDCTIRGYDIPTKTQLFVNLWAIGRDPNYWENPLEFWPERFLREDGSLKSQLDVKGQHFHLLPFGSGRRICPGISLALQVVQTSLAAMIQCFEWRVGGGNGNVDMEEGPDAALAHPLVCVPVARLNPFPNYTM* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g1555 515 Pfam Cytochrome P450 35 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1555 515 PRINTS E-class P450 group I signature 401 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1555 515 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1555 515 PRINTS E-class P450 group I signature 361 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1555 515 PRINTS E-class P450 group I signature 453 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1555 515 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1555 515 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1555 515 PRINTS E-class P450 group I signature 318 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1555 515 PRINTS E-class P450 group I signature 443 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1555 515 PRINTS E-class P450 group I signature 298 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1555 515 Gene3D Cytochrome P450 26 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1555 515 Coils Coil 278 302 - -
Vvi8g1555 515 SUPERFAMILY Cytochrome P450 27 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1555 515 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 10 498 - -
Vvi8g1555 515 CDD CYP93 66 503 - -
Vvi8g1555 515 FunFam Cytochrome P450 family protein 26 501 - -
Vvi8g1555 515 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1555 515 PRINTS P450 superfamily signature 444 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1555 515 PRINTS P450 superfamily signature 453 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1555 515 PRINTS P450 superfamily signature 309 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1555 515 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 446 455 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi8g1555 Vvi-Chr8 21184526 21186221 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi8g1555 1 506 Cytochrome P450 AT5G06900 50.000 1.39e-180 515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g1555 K24188 - vvi:100243444 1017.68