Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g1554 ATGGCTGATTTCCAGAACTACATCCCTTACATTCTCATCGGGCTCCTATCAGCCATCATGGTCCGGCCTTTCTTCACCAAATATCGAAGAACAAAACTTCGTCTTCCACCCGGCCCCGTTGCCCTACCTATCATTGGACACCTCCACCTTCTTCTTCCTGTCTCGAACGTTCATGTAGTCTATCAGAAGCTCTCATGGCGCTATGGACCCCTAATGCACTTCTTCTTTGGCTCTGTCCCTTGTGTTGTTGTGTCCTCTCCAGAGATGGCAAAAGAGTTACTTCAAAACCAAGATGTTGTATTCTCCAACCGGCCCAAAAAGGTCGTTGCTGAACTTGTAGCCTATGGCGACGCTGACCTTACATATGCTCCATATGGAGCAAAGTGGAGATTCATGAAGAAACTGTGTATGACCGAACTACTTGGCATGCAGACGATACACCACTTTGGTCCCATTAGGCGCGAGGAGAGGAACCGACTCTTACAGAGACTACTAAAAAAGGCCAAAGCTGGTGAGGCGGTTGATGTTAAAGCTGAGCTTTTGAGGCTAACCGGTGACATAGTGTCAAGAATGAGTATGAGCCGAAGATGCTCAGACAATGAAGATGAGGCTGCCGGGGTGAAGAAGTCGATACTAGAAATGGCCAGTATGGCAATGAAGCTTAATGTGACAGATTTTATCTGGTTCTGTAAGAAATTAGATATTCAGGGTTTCTTAAAGAAGGCAAAGGCAGCTCGTGATAAATACGACTCCATGATCGAGAGGATTATAAGCGAGCATGAAGAGGCGAGGAGGAAGAAGGAAGCAGGTGATGGGAATGGTGAAGTGAAGGATTTGATTGATATGTTACTTGATACAACAGAAGACGAGAAGGCTGAGATGAGATTGACAAGAGAGAACATTAAGGCCTTGATGCTGAATATGATTGGAGGAGGGACAACTTCACCTGCTCATGCGATGGAATGGGCACTCGCAGAACTAATTAACCGCCCAAATCTTATGGAGAAAGCAAGACATGAAATTGATTCTGTCGTCGGAAAGGACAGACTGGTGGAAGAATCAGATATTACCAACCTTCCCTATGTTGAGGCCATTGTGAGGGAAACGCTAAGGCTTCACCCTCCGGGTCATTTCATTGTTAGGGAATCAATTGAAGACTGCAAAGTTGGAGGCTATGACATTCCTGCGAAGACCCAGCTAATTGTTAATGTGTGGGCTATCGGAAGGGATCCAAATTCCTGGGAGAACCCACTCGAGTTCCAGCCTGAGAGATTTCTCAACGAGGGAGGTATAAACAGGCGATTGAATGTAAGAGGACAGCAGTTCCATCTGCTGCCCTTTGGTAGTGGAAGAAGACTTTGCCCCGGAACTACACTAGCACTGCAGGTTCTCCATACAACCATTGCTGCTCTCATTCAGTGCTTTGACTGGAAAGTAAACGGCAATATTGATATGAAAGAGGGATTTGGCTCAACCCGAGCAACCCCCTTGGTCTGCGTCCCAGTGGTCAGGCTGAACCCACTACCAATATATACAAGTTGA 1542 0.465 MADFQNYIPYILIGLLSAIMVRPFFTKYRRTKLRLPPGPVALPIIGHLHLLLPVSNVHVVYQKLSWRYGPLMHFFFGSVPCVVVSSPEMAKELLQNQDVVFSNRPKKVVAELVAYGDADLTYAPYGAKWRFMKKLCMTELLGMQTIHHFGPIRREERNRLLQRLLKKAKAGEAVDVKAELLRLTGDIVSRMSMSRRCSDNEDEAAGVKKSILEMASMAMKLNVTDFIWFCKKLDIQGFLKKAKAARDKYDSMIERIISEHEEARRKKEAGDGNGEVKDLIDMLLDTTEDEKAEMRLTRENIKALMLNMIGGGTTSPAHAMEWALAELINRPNLMEKARHEIDSVVGKDRLVEESDITNLPYVEAIVRETLRLHPPGHFIVRESIEDCKVGGYDIPAKTQLIVNVWAIGRDPNSWENPLEFQPERFLNEGGINRRLNVRGQQFHLLPFGSGRRLCPGTTLALQVLHTTIAALIQCFDWKVNGNIDMKEGFGSTRATPLVCVPVVRLNPLPIYTS* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g1554 513 Gene3D Cytochrome P450 23 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1554 513 Coils Coil 284 304 - -
Vvi8g1554 513 CDD CYP93 69 501 - -
Vvi8g1554 513 PRINTS E-class P450 group I signature 89 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1554 513 PRINTS E-class P450 group I signature 403 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1554 513 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1554 513 PRINTS E-class P450 group I signature 454 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1554 513 PRINTS E-class P450 group I signature 363 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1554 513 PRINTS E-class P450 group I signature 183 201 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1554 513 PRINTS E-class P450 group I signature 320 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1554 513 PRINTS E-class P450 group I signature 300 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1554 513 PRINTS E-class P450 group I signature 444 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1554 513 PANTHER CYTOCHROME P450 98A9 15 506 - -
Vvi8g1554 513 Pfam Cytochrome P450 36 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1554 513 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1554 513 PRINTS P450 superfamily signature 311 328 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1554 513 PRINTS P450 superfamily signature 445 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1554 513 PRINTS P450 superfamily signature 454 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1554 513 SUPERFAMILY Cytochrome P450 36 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1554 513 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 447 456 IPR017972 GO:0005506|GO:0016705
Vvi8g1554 513 FunFam Cytochrome P450 family protein 27 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi8g1554 Vvi-Chr8 21179266 21180990 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi8g1554 1 504 Cytochrome P450 AT5G06900 48.425 2.06e-171 491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g1554 K24188 - vvi:100248575 1010.36