Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g1553 ATGAAACCAACATCTTGGTCTCACCGTTGCTGTCCCTCATTCATGGCTGACTTCCAAGGTTACATCACTCTCTTCCTAATTTGGTTAGTCTCCACCATCCTGATTCGAGCCATCTTCACCAAATGGCGAACAACCGTTCATCTTCCACCAAGCCCACTAGCCCTGCCAATCATTGGTCACCTCCATCTCCTTGCTCCTATACCTCACCAAGCTTTTCACAAGCTCTCACACCGCTATGGACCATTAATTCATCTCTTCCTCGGATCTGTCCCCTGTGTTGTTGCTTCCTCCCCAGAAATGGCCAAAGAGTTCCTCAAAACTCATGAAACTTCATTCTCTAATCGACCCAAAATTGCTGCTGTTGATTTCTTGACATATGGCTCAGCTGACTTTTCCTTTGCTCCCTATGGGCTCTACTGGAAGTTCATGAAGAAACTTTGCATGTCAGAACTTCTTTCTGGTCGAAGGCTAGACCAGTTCTATCACATTAGATGTACAGAGATAAAATGGTTTATGCAGTCAATAATGGAAAAAGCTGAAGCCGGTGAGGAAATTGATGTTCGAGAAGAACTTATAAGGGTGACTAACAATGTGATATCAACAATGACCATGAGTCTAAGGTGTTCTGATAGTGAAAATGAAGCTGGTGAAGTAAAGAGATTGGTGCAAGAAGTAGCTGAGCTCACTGGAAAGTTTAATTTGTCAGATTTTATTTGGTTTTGTAAGAATTTAGATTTGCAAGGATTTGGGAAAAGGCTCAAGGAAGTTCATGAGAGGTTTGACTCAATGATAGAGAAGATTATGAGGGAGCATGAGGAGGCAAGGAAGAAGGAGATGGGTGGTGGAGGCGATGCAGCAAAGGATGTACTTGATATTTTACTTGACATATCAGAAGATCAAAGCTCAGAAATAAAATTAACAAGAGAGAACATCAAGGCCTTCATCCTGGATATATTTGCAGCAGGGACTGACACATCTGCCATTACAACCGAATGGGCACTAGCAGAGCTGATCAACAACCCAAATATTATGGAGAAAGCAAGACAAGAGATAGATTCCGTGGTTGGCAAAAACAAACTAGTAGAAGAATCAGATATCGCAAACCTTCCCTACCTCCAAGCCATTGTTAAGGAAACACTAAGGCTACATCCCACGGGTCCATTGATTGTTAGAGAGTCATCTGAGGACTGCACCATTGGGGGTTATGATATTCCCGCAGGAACCCGGCTATTTGTTAATGTGTGGGCTATAGGAAGGGATCCAAACCACTGGGAGAACCCACTTGAGTTCCAGCCTGAGAGGTTTGTTAATGAAGACGGGACTTTAAAGAGCCAGTTGGAAGTTAGGGGACAACATTTTTATCTGCTGCCATTTGGAAGTGGAAGAAGAGGTTGCCCTGGAACTTCACTAGCACTACAGGTCGTCCAAACAAGCCTTGCTGCTATGATTCAGTGCTTTGAGTGGAAGGTGAGGGACGGGGGCAATGGAACTCTTAACATGGAAGAGGGACCAGGGCTCACTCTTCCAAGGGCTCATCCTTTGATTTGTGTCCCAGTGGCTAGACTCCACCTATTTCCATAG 1581 0.4421 MKPTSWSHRCCPSFMADFQGYITLFLIWLVSTILIRAIFTKWRTTVHLPPSPLALPIIGHLHLLAPIPHQAFHKLSHRYGPLIHLFLGSVPCVVASSPEMAKEFLKTHETSFSNRPKIAAVDFLTYGSADFSFAPYGLYWKFMKKLCMSELLSGRRLDQFYHIRCTEIKWFMQSIMEKAEAGEEIDVREELIRVTNNVISTMTMSLRCSDSENEAGEVKRLVQEVAELTGKFNLSDFIWFCKNLDLQGFGKRLKEVHERFDSMIEKIMREHEEARKKEMGGGGDAAKDVLDILLDISEDQSSEIKLTRENIKAFILDIFAAGTDTSAITTEWALAELINNPNIMEKARQEIDSVVGKNKLVEESDIANLPYLQAIVKETLRLHPTGPLIVRESSEDCTIGGYDIPAGTRLFVNVWAIGRDPNHWENPLEFQPERFVNEDGTLKSQLEVRGQHFYLLPFGSGRRGCPGTSLALQVVQTSLAAMIQCFEWKVRDGGNGTLNMEEGPGLTLPRAHPLICVPVARLHLFP* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g1553 526 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 24 515 - -
Vvi8g1553 526 FunFam Cytochrome P450 family protein 40 516 - -
Vvi8g1553 526 Coils Coil 257 277 - -
Vvi8g1553 526 CDD CYP93 80 518 - -
Vvi8g1553 526 PRINTS P450 superfamily signature 321 338 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1553 526 PRINTS P450 superfamily signature 456 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1553 526 PRINTS P450 superfamily signature 374 385 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1553 526 PRINTS P450 superfamily signature 465 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1553 526 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 458 467 IPR017972 GO:0005506|GO:0016705
Vvi8g1553 526 SUPERFAMILY Cytochrome P450 49 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1553 526 PRINTS E-class P450 group I signature 373 391 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1553 526 PRINTS E-class P450 group I signature 310 327 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1553 526 PRINTS E-class P450 group I signature 194 212 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1553 526 PRINTS E-class P450 group I signature 330 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1553 526 PRINTS E-class P450 group I signature 465 488 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1553 526 PRINTS E-class P450 group I signature 100 121 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1553 526 PRINTS E-class P450 group I signature 455 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1553 526 PRINTS E-class P450 group I signature 76 95 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1553 526 PRINTS E-class P450 group I signature 413 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1553 526 Gene3D Cytochrome P450 40 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1553 526 Pfam Cytochrome P450 49 516 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi8g1553 Vvi-Chr8 21172463 21174797 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi8g1553 15 521 Cytochrome P450 AT5G06900 53.635 0.0 567
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g1553 K24188 - vvi:100253679 1072.38