Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g1511 ATGGAGATTACAGAGAAGAAGGAAGCAGAGAGCAAGGGCTTGAACCCCCAATCCGTGACTGAAGCGACCTCATTCAATAGTGACAAAGAAGCCGAAGATCGGGAACGCCAGGCTCGTGATCTCAAAGCTGGTCTTCATCCTCTGAAGCACAAGTTTGTATTTTGGTACACTCGTCGAACACCTGGAGTTCGAACCCAAACATCATACGAGGACAATATAAAGAAAATTGTGGATTTCAGTACAGTTGAAGGTTTTTGGATTTGCTATTGCCATTTGGCCCGTCCATCTGCTTTGCCTAGCCCAACTGATTTGCATCTTTTCAAAGAGGGAATTCGCCCCCTATGGGAGGATTCTGCTAATTGCAATGGTGGTAAGTGGATAATTAGATTCAAAAAAGTCGTGTCAGGTCGCTTCTGGGAAGATCTGGTTCTTGCCTTAGTGGGTGACCAACTTGATTATGGTGATAACATATGTGGTGCTGTACTAAGCATTCGTTTCAATGAAGATATATTGAGTGTGTGGAATCGCAATGCATCCGATCATCAGGCTGTAATGGCTCTAAGAGATGCAATCAAACGGCACTTGAAGCTTCCCCATGGCTATGTTATGGAATACAAGGCTCATGATGCTTCTCTCCGTGACAACTCATCTTATAGGAACACATGGTTGAGAGGATGA 678 0.444 MEITEKKEAESKGLNPQSVTEATSFNSDKEAEDRERQARDLKAGLHPLKHKFVFWYTRRTPGVRTQTSYEDNIKKIVDFSTVEGFWICYCHLARPSALPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDYGDNICGAVLSIRFNEDILSVWNRNASDHQAVMALRDAIKRHLKLPHGYVMEYKAHDASLRDNSSYRNTWLRG* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g1511 225 MobiDBLite consensus disorder prediction 1 37 - -
Vvi8g1511 225 Pfam Eukaryotic initiation factor 4E 47 205 IPR001040 GO:0003723|GO:0003743|GO:0006413
Vvi8g1511 225 ProSitePatterns Eukaryotic initiation factor 4E signature. 103 126 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Vvi8g1511 225 Gene3D RNA Cap, Translation Initiation Factor Eif4e 18 218 IPR023398 -
Vvi8g1511 225 FunFam Eukaryotic translation initiation factor NCBP 18 218 - -
Vvi8g1511 225 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 20 214 IPR001040 GO:0003723|GO:0003743|GO:0006413
Vvi8g1511 225 SUPERFAMILY eIF4e-like 16 221 IPR023398 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi8g1511 Vvi-Chr8 20893010 20898205 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi8g1511 1 225 Eukaryotic Initiation Factors Gene Family AT5G18110 74.336 2.06e-123 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g1511 K03259 - vvi:100258939 470.7