Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vvi8g1505 | ATGAGAAATCCGGCATCTGCGTCTACGAGTAAGACTCCGTGCTGTACCAAGGTTGGGTTGAAAAGAGGACCATGGACGCCTGAGGAAGATGAGCTTCTAGCTAATTATGTGAAGAGAGAAGGTGAAGGGAGGTGGAGGACGCTGCCGAAGCGAGCTGGGTTGCTGCGGTGCGGCAAGAGCTGTCGCCTCCGGTGGATGAATTATCTTCGGCCGTCAGTGAAGCGCGGCCAGATAGCTCCCGATGAGGAAGATCTCATTCTTCGCCTCCATCGCCTGCTCGGTAACAGGTGGTCTCTGATTGCCGGAAGGATCCCGGGGCGTACAGACAATGAGATCAAGAACTACTGGAACACCCATCTCAGCAAGAAACTCATCAGCCAAGGAATAGATCCCAGAACCCACAAGCCACTAAACCCTAAACCTAATCCATCACCAGATGTTAATGCTCCTGTCTCAAAATCAATTCCAAATGCAAACCCTAACCCTAGTTCTTCCCGGGTGGGAGAAATTGGAAGCAACCATGAGGTCAAGGAGATTGAAAGTAATGAAAATCACAAGGAGCCGCCTAACCTGGATCAGTATCACAGTCCACTTGCGGCCGATAGCAATGAGAATTGGCAAAGCGCAGATGGGTTGGTAACGGGACTACAAAGCACCCATGGTACCAGCAACGATGACGAAGACGATATCGGGTTCTGCAACGACGATACATTCTCTTCATTTTTGAATTCTTTGATTAACGAGGATGTGTTTGGAAATCATAATCATCATCATCAGCAGCAGCAGCAACAGCAGCTGCAGCAGCTGCAGCAGCCATCTAATGTGATTGCACCATTGCCCCACCCAGCAATTTCTGTGCAGGCCACCTTCAGTAGTAGCCCTAGAACTGTCTGGGAACCTGCTGCACTAACATCTACATCGGCTCCTTTAGTCCACGATCAAAAAGACTCCATGTCTCCCTGA | 963 | 0.4995 | MRNPASASTSKTPCCTKVGLKRGPWTPEEDELLANYVKREGEGRWRTLPKRAGLLRCGKSCRLRWMNYLRPSVKRGQIAPDEEDLILRLHRLLGNRWSLIAGRIPGRTDNEIKNYWNTHLSKKLISQGIDPRTHKPLNPKPNPSPDVNAPVSKSIPNANPNPSSSRVGEIGSNHEVKEIESNENHKEPPNLDQYHSPLAADSNENWQSADGLVTGLQSTHGTSNDDEDDIGFCNDDTFSSFLNSLINEDVFGNHNHHHQQQQQQQLQQLQQPSNVIAPLPHPAISVQATFSSSPRTVWEPAALTSTSAPLVHDQKDSMSP* | 321 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vvi8g1505 | 320 | CDD | SANT | 80 | 120 | IPR001005 | - | |
Vvi8g1505 | 320 | FunFam | transcription repressor MYB5-like | 79 | 146 | - | - | |
Vvi8g1505 | 320 | MobiDBLite | consensus disorder prediction | 128 | 202 | - | - | |
Vvi8g1505 | 320 | SUPERFAMILY | Homeodomain-like | 19 | 116 | IPR009057 | - | |
Vvi8g1505 | 320 | CDD | SANT | 24 | 69 | IPR001005 | - | |
Vvi8g1505 | 320 | Gene3D | - | 19 | 75 | - | - | |
Vvi8g1505 | 320 | PANTHER | TRANSCRIPTION FACTOR MYB8-RELATED-RELATED | 11 | 253 | - | - | |
Vvi8g1505 | 320 | Gene3D | - | 79 | 143 | - | - | |
Vvi8g1505 | 320 | ProSiteProfiles | Myb-like domain profile. | 17 | 69 | IPR001005 | - | |
Vvi8g1505 | 320 | FunFam | Myb transcription factor | 19 | 75 | - | - | |
Vvi8g1505 | 320 | Pfam | Myb-like DNA-binding domain | 79 | 120 | IPR001005 | - | |
Vvi8g1505 | 320 | Pfam | Myb-like DNA-binding domain | 22 | 69 | IPR001005 | - | |
Vvi8g1505 | 320 | MobiDBLite | consensus disorder prediction | 147 | 170 | - | - | |
Vvi8g1505 | 320 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 17 | 69 | IPR017930 | - | |
Vvi8g1505 | 320 | SMART | sant | 21 | 71 | IPR001005 | - | |
Vvi8g1505 | 320 | SMART | sant | 74 | 122 | IPR001005 | - | |
Vvi8g1505 | 320 | ProSiteProfiles | Myb-like domain profile. | 70 | 120 | IPR001005 | - | |
Vvi8g1505 | 320 | MobiDBLite | consensus disorder prediction | 171 | 190 | - | - | |
Vvi8g1505 | 320 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 70 | 124 | IPR017930 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vvi8g1505 | Vvi-Chr8 | 20865562 | 20866630 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vvi8g1505 | 2 | 253 | MYB Transcription Factor Family | AT3G13540 | 56.250 | 8.68e-89 | 264 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB | Vvi8g1505 | Myb_DNA-binding | 1.9e-15 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vvi8g1505 | K09422 | - | vvi:100233122 | 624.009 |