Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g1498 ATGGCAACTGCTACATATCCTCCACCACCACCGTATTACAGACTCTACAAAGATTACATACAAAACCCTAAATCTGCCCCAGAGCCTCCACCTCCTATCGAAGGGACCTACGCTCTCTTTGGTGCCACCTACACTACTGATGATGTACTTCCAAGCTTAGAAGAACAAGGAGTTCGTCAGTTGTATCCTAAAGGATCCAATGTTGATTTCAAGAAGGAATTAAGGTCGCTTAACAGAGAATTGCAGTTGCACTTGTTGGAGCTTGCTGATGTTCTTGTTGAGAGACCATCACAATATGCAAGGAGGGTTGAAGACATATCCCTCATATTCAAGAACTTACATCACCTTCTCAATTCATTGCGACCACACCAGGCAAGGGCAACGCTAATTCACATTCTAGAACTTCAGATACAACGTCGTAAACAAGCAGTGGAGGATATCAAGAGAAGGAGAGAAGAAGCACAAAGACTTCTCAAAGAGGCCGTGGGAACCTTGGAAGGACAGTAG 507 0.4438 MATATYPPPPPYYRLYKDYIQNPKSAPEPPPPIEGTYALFGATYTTDDVLPSLEEQGVRQLYPKGSNVDFKKELRSLNRELQLHLLELADVLVERPSQYARRVEDISLIFKNLHHLLNSLRPHQARATLIHILELQIQRRKQAVEDIKRRREEAQRLLKEAVGTLEGQ* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g1498 168 Coils Coil 130 164 - -
Vvi8g1498 168 Coils Coil 67 87 - -
Vvi8g1498 168 Pfam MED7 protein 4 157 IPR009244 GO:0003712|GO:0006357|GO:0016592
Vvi8g1498 168 Gene3D - 61 159 IPR044888 -
Vvi8g1498 168 SUPERFAMILY Mediator hinge subcomplex-like 67 159 IPR037212 GO:0016592
Vvi8g1498 168 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 7 2 168 IPR009244 GO:0003712|GO:0006357|GO:0016592
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MED7 Vvi8g1498 Med7 2.9e-43 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g1498 K15148 - vvi:100257245 290.426