Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g1463 ATGCAAACCGTTGGAAACGCTGCTGAGGGTGCTGCTGCTCCCAGATGTTATGTTAACTTCGAATATATCTGCAAGTTTTGCTTCAGGACCTTCAAGTCTGGGCATGCTTTGGGGGGCCACCAAAACATCCATCGAAATGATGAGAACAGGGAGGTTGGAAAATACTGTGGTGTGTCTTTTGGTTTTGAGAATCGGAGCCAACGCAAAGTTGCTGCTACTGATCAGAAAACTAAATGGGGCCCTAGGGTGCAACACCTAAGGGTGGGTGATGGATCTAGTTCTGGGCTGAACCACCAAGGTGGTTCATCTGCACCTGGGTTGCACCCAGGGGTTGGTGTTGGACTTGTGGCTCAAGATTCTATTTTAGCCATGGCTAGGCCTAGGCTCAACAACCAGGGTCCTCCTCCTCCAATTGCACCCACGTTGAGCCCAGTGAGTATTGGTAGTGAGACAGGGGCTATTTATTATGCTGAAACCATACCTGGGTCTAGGTTCAATCAAGGTCCACAATCCGCTCGTCAGGTGCACCCAGGGCTTGGAGATGAAAATCCTCGTATTGGTGTGGGGAGTGGGGGTTTACGTTCTACATGGGCCATGCCTAGGGCTGGGCTGAACGTCCAGGGTGCTCATACTGAACCAGGATTGGACTCGGCTGTTGGGGACAATTTTTCCAACCTTGCTGCTGGGAATGGGTTCAATCTCCGCATAGAACCCACTGGCCTCGATGAAAATGTAGACCTCACCCTGGATTTGACCCCTGCTGGCGCAAAACCAGTCCGAGCTCCAACAATGGAGGAATCTCTGAAACTTACTATTGCCCCACCTGCACTGGCCCCTCGTTGCTATCACTCATATCGCCCACCAGGACAAGCCAAGCCTCCTTATGACGGTTTCCTTGAGGATCATTTTGGGAGGTGGAAGCTGAACAATCATCCGAGCAAACGAACGGACTCTGCAACGTACTCGGAGACAACAGTAAGTTCGGGAAGCAGTGGCGTGGAAGTAAGCTCGCGGCTAAGCGACGGGGTGGACTTGGAGTTGAAGCTCTGA 1050 0.5181 MQTVGNAAEGAAAPRCYVNFEYICKFCFRTFKSGHALGGHQNIHRNDENREVGKYCGVSFGFENRSQRKVAATDQKTKWGPRVQHLRVGDGSSSGLNHQGGSSAPGLHPGVGVGLVAQDSILAMARPRLNNQGPPPPIAPTLSPVSIGSETGAIYYAETIPGSRFNQGPQSARQVHPGLGDENPRIGVGSGGLRSTWAMPRAGLNVQGAHTEPGLDSAVGDNFSNLAAGNGFNLRIEPTGLDENVDLTLDLTPAGAKPVRAPTMEESLKLTIAPPALAPRCYHSYRPPGQAKPPYDGFLEDHFGRWKLNNHPSKRTDSATYSETTVSSGSSGVEVSSRLSDGVDLELKL* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g1463 349 ProSitePatterns Zinc finger C2H2 type domain signature. 24 44 IPR013087 -
Vvi8g1463 349 MobiDBLite consensus disorder prediction 310 349 - -
Vvi8g1463 349 MobiDBLite consensus disorder prediction 165 184 - -
Vvi8g1463 349 ProSiteProfiles Zinc finger C2H2 type domain profile. 22 49 IPR013087 -
Vvi8g1463 349 SUPERFAMILY beta-beta-alpha zinc fingers 21 48 IPR036236 -
Vvi8g1463 349 MobiDBLite consensus disorder prediction 313 337 - -
Vvi8g1463 349 MobiDBLite consensus disorder prediction 87 109 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi8g1463 8 50 C2H2 Transcription Factor Family AT2G37740 51.163 1.49e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g1463 - - pop:7455632 46.595