Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g1447 ATGGCCTCTTCTCCATCTCATTTCTTCGTACTAATTGCCACCATTTTCATATCTTCACTGTTTCATCCCTCAACTGCTCAACTAAACTCGTCCTTTTACTCCTGCACATGCCCCAATGCATACACCATTGTCCGCAGCATTGTTCACCAGGCCATGGCGTCTGATACCCGGATCGGAGCTAGCCTAGTTCGTTTACATTTCCATGATTGCTTCGCCAACGGATGTGATGCTTCAATTTTGCTGGACGACAGCCCGAGCATACAGAGCGAGAAACATGCTGCTCCCAATTTTAAGTCCGCTCGGGGATTCGAGGTAGTTGACCGCATCAAGGCCGCTCTTGAATGTTCGTGCCGCGGAGTTGTCTCCTGCGCTGACATTCTTGCTCTGGCATCCGAGGCATCAGTCTCTTTGTCAGGGGGTCCTTCATGGACTGTTCTACTGGGCAGAAGGGACAGCACAACGGCCAACCAAGCCGGAGCCAACACTTCAATTCCTTCTCCCTCTGAAGGCTTGGCCAACATTTCCAACAAGTTTTCTGCAGTTGGCCTCGAGATTACCGATCTAGTTGCCTTATCCGGCGCTCACACCTTTGGAAAAGCTCAATGTCGCACATTCAGCGAGAGACTATACAATTTCAAGGGCACCGGCGGTCCAGATCCGACGCTCAACGCAACATACTTGGCTGTTCTTCAACAGATATGTCCAGAGGATGGGAATGGGGGCTTTGGTCTAGCCAACCTTGATCCCACAAATACATCTGACGGTCATGACTTTGATAATAACTACTTTTCCAATCTTCAAAGCCTCCAAGGCCTTCTCCAATCCGATCAAGAGTTATTTTCAACACCCAATGCTAAAATAATCGCAATTGTGAACAGCTTTAGTGGTGATCAGAGCGCCTTCTTTCAGAGCTTTGCTCAGTCCATGGTAAAGATGGGAAACATTAGCCCGTTAACAGGGAAGGATGGGGAGATTAGGTTGAATTGTAGAAAGGTTAATGCAGGCTGA 1008 0.4851 MASSPSHFFVLIATIFISSLFHPSTAQLNSSFYSCTCPNAYTIVRSIVHQAMASDTRIGASLVRLHFHDCFANGCDASILLDDSPSIQSEKHAAPNFKSARGFEVVDRIKAALECSCRGVVSCADILALASEASVSLSGGPSWTVLLGRRDSTTANQAGANTSIPSPSEGLANISNKFSAVGLEITDLVALSGAHTFGKAQCRTFSERLYNFKGTGGPDPTLNATYLAVLQQICPEDGNGGFGLANLDPTNTSDGHDFDNNYFSNLQSLQGLLQSDQELFSTPNAKIIAIVNSFSGDQSAFFQSFAQSMVKMGNISPLTGKDGEIRLNCRKVNAG* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g1447 335 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi8g1447 335 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi8g1447 335 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi8g1447 335 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi8g1447 335 PRINTS Haem peroxidase superfamily signature 251 266 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi8g1447 335 SUPERFAMILY Heme-dependent peroxidases 27 333 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vvi8g1447 335 PRINTS Plant peroxidase signature 249 264 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi8g1447 335 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi8g1447 335 PRINTS Plant peroxidase signature 186 198 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi8g1447 335 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi8g1447 335 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi8g1447 335 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi8g1447 335 PRINTS Plant peroxidase signature 265 282 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi8g1447 335 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi8g1447 335 PRINTS Plant peroxidase signature 307 320 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi8g1447 335 FunFam Peroxidase 31 176 - -
Vvi8g1447 335 FunFam Peroxidase 165 312 - -
Vvi8g1447 335 Pfam Peroxidase 44 294 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi8g1447 335 ProSitePatterns Peroxidases proximal heme-ligand signature. 187 197 IPR019793 -
Vvi8g1447 335 ProSiteProfiles Plant heme peroxidase family profile. 27 333 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi8g1447 335 PANTHER PEROXIDASE 72-RELATED 25 332 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vvi8g1447 335 Gene3D Peroxidase, domain 2 165 312 - -
Vvi8g1447 335 Gene3D - 32 333 - -
Vvi8g1447 335 CDD secretory_peroxidase 27 332 IPR033905 GO:0004601|GO:0042744
Vvi8g1447 335 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi8g1447 Vvi-Chr8 20339203 20340475 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi8g1447 8 333 Peroxidase AT5G06720 68.712 4.92e-162 454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g1447 K00430 - vvi:100265920 654.44