Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g1431 ATGGAAGCAATGGAAATCGACGCAGAGAAGCATCTCCAGAGAAAGCAGTCTCTCTATGAATCCCTGGATGAGAAGTTTCGGATCGAGAAAGAGACGTATAGGGGTCAGCAGTACAGCCAGATTTACTTTGCTCGACTCCACATGATGAGAACTCTCATCTACTCCCTCATTCCTAATTGGAAACCCCATTTGCCTGTTTGTACAGTTTTGGGGCTGGAAGAAGGCAAGGAATGTATCATTGTTGGAACTCTGTACAAGCACATGAAACTTAAACCATGCATTCTTGATGAGTACTCCAAGGAGAGATCTGTGGCCCCGCTTGTCAAGCCTCATAACTTTATGCACTCAGATGATAGTTTGGTGCTGGAGGATGAGAGTGGAAGAGTTAAACTTGGCGGAACAATGCTTTTACCTTCTGTATATGTTACAGGGACTGTTGTTGGTCTGCATGGAAAAGAAACCAGTGCTGGTGAATTTTTGGTACAAGATATTCTGGACGCTGACCTACCACCGCAGATAGAGCTGCCACTAAAATCAAGGGAGGACAAGTATGTTGTTTTTGTATCTGGGCTAAGTGTTGGAAGCAGCACTTCTAATCCTCTCCAATTTCAGCTTCTTGTTGATCATATAACAGGACATCTAGGAGATGAGAAGGAACAAGGTATTGCAGCACAGATAGTTCATGTTGTAATTGCTGGGAATTCTGTTGCAGTTCCACGTGGACTTCTGAATGGACAGAATTTAGCTTCGAAGGATCAGTCAAGGTTGTCCGAACCAATTAAAGAGCTGGATATCTTGTTGACTCAGATTGCTGCAGGTTTGCCTTTGGATATCATGCCAGGGCCTGATGACCCAGCAAACTTCTCATTACCTCAACAGCCCTTGCATAGATGCCTTTTCCCTGGATCATCAGCTTATAACTCATTTAGATCTTGTACTAATCCTCATTCCTTTGAGCTTGAAAATATCAGATTTCTTGGAACATCAGGTCAGAATGTGGATGATCTTGAGAAGTATTCAGAGGCAAAAGATAAGCTTGAATTCATGGAAAGGACGTTACGGTGGAGGCATCTAGCACCAACAGCACCTAATACTCTTGGGTGCTATCCATTCACTGATAGAGATCCTTTCTTGATCGAGAGCTGTCCTCATGTTTACTTTGTTGGTAATCAGGATAAATATGAAACTCGCTTAATAAAGGTGCAGGATCAGAGGGACAGGTTGTAA 1227 0.4311 MEAMEIDAEKHLQRKQSLYESLDEKFRIEKETYRGQQYSQIYFARLHMMRTLIYSLIPNWKPHLPVCTVLGLEEGKECIIVGTLYKHMKLKPCILDEYSKERSVAPLVKPHNFMHSDDSLVLEDESGRVKLGGTMLLPSVYVTGTVVGLHGKETSAGEFLVQDILDADLPPQIELPLKSREDKYVVFVSGLSVGSSTSNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVIAGNSVAVPRGLLNGQNLASKDQSRLSEPIKELDILLTQIAAGLPLDIMPGPDDPANFSLPQQPLHRCLFPGSSAYNSFRSCTNPHSFELENIRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAPNTLGCYPFTDRDPFLIESCPHVYFVGNQDKYETRLIKVQDQRDRL* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g1431 408 Gene3D - 176 408 - -
Vvi8g1431 408 CDD MPP_PolD2_C 184 408 IPR041863 -
Vvi8g1431 408 Gene3D - 43 168 - -
Vvi8g1431 408 PANTHER DNA POLYMERASE DELTA SUBUNIT 2 7 404 IPR024826 -
Vvi8g1431 408 FunFam DNA polymerase delta subunit 2 43 167 - -
Vvi8g1431 408 FunFam DNA polymerase delta small subunit 169 408 - -
Vvi8g1431 408 Pfam DNA polymerase delta subunit OB-fold domain 37 164 IPR040663 -
Vvi8g1431 408 Pfam DNA polymerase alpha/epsilon subunit B 185 394 IPR007185 GO:0003677|GO:0006260
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi8g1431 4 400 Core DNA Replication Machinery Family AT2G42120 79.849 0.0 685
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g1431 K02328 - vvi:100241865 803.127