Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vvi8g1419 | ATGGCTTCCAAAGGACCAAGGTCTAAGCTTGATCATGAGACAAGAGCTAGGCGCCAAAAGGCACTTGAGGCTCCTAGGGAGCCCCGTCGTCCTAAAACACACTGGGATCATGTTTTAGATGAGATGGTTTGGCTCTCAAAGGACTTTGAGTCGGAGAGGAAATGGAAATTGGCTCAGGCAAAGAAGGTCGCTTTAAGAGCTAGCAAGGGCATGTTGGATCAAGCCACAAGGGGAGAAAAGAGAGTTAAGGAAGAAGAACAACGTTTGCGAAAGGTTGCACTTACCATTTCAAAGGATGTAAAGAAGTTCTGGATCAAAATAGAGAAGCTGGTGCTTTACAAACATCAAATGGAGCTCGATGAGAAAAAGAAAAAGGCACTTGATAAACAGCTTGAGTTCCTTTTGGGGCAAACTGAGAGGTACTCAACAATGTTGGCAGAGAACCTTGCGGATACATACCAACCAACCCAACAGTATTTACCCAAGGAACGATGTAGTATTCAATATAAAGAAGTGGACGACCCTGGATTTAAAGAAGTACCTCAGTCAGGTATTGCTGATGTTGATGAAGATTATGATATGCAGTCTGAAGAGGAATTGGAAGATGATGAGCATACCATCGAGGAAGATGAGGCCCTCATTACTGAAGAGGAAAGGCAAGAAGAATTGGAAGCACTGCACAATGAGATAGATCTACCGCTTGAGGAGCTGCTCAAACGTTATGCAATGAAGAAAGTTAGCAGTGGTAGTAGTCAAGACAAGGATGAAGAGGAAGCAGAACCAACTTCAGTGGGGGATGATCATTTTGGGGGTGAAGGACAGGATCTGTCTGATACTTGTAAGATTGATAAAAACAGCTCACTCACAGTCATCGGTCGTCGTTGTGGTGAAAGTAATGGTAGCTTATCCATTTCAGAGCACCATTTGTTAGAAGTTGATACATGTCAAGCCAAGAATGTGTCAGAAATTTCTAGGGAGTCAGATGAAGAAAGTAAAGTATATGATTTTAATGATGAACAGGAGGATGGTGACTTTGTTCTTGCAACTGGAGAGGAAAAGGATGATGAGACAACCTTGCTGGAGGAGGAGGAACTTGCAAAAGAAGAATCAAATGATCCCATAGATGAGATCGCTTTACTGCAGAAGGAGAGCGAAATTCCTCTAGAAGAACTGCTGGCAAGGTATAAAAAGGACGCTGATGAAGATGTAGAGGATGATTCTGATTATGCCTCTGCGTCAGAGGACTTCTTGGATTCTCCAGCACATCAGGACACTGAATTGAACCAGCAGCCTGGTTGTGTGGATGATGATGATGACGAACCTGGGGGAAGACAGCCATTTGTGCAGTCTGTGACAGAAGAACATGCAGAAGGTTCTGAAAAACAATCTGATGAAGCAAGGGAGAGTGAGAATCGAATTGCTGATGCAGCTGCTGCCGCAAGATCAGCACAACCCACTGGAAATACCTTCTCAACAACCAAAGTCCGTACAAAGTTCCCATTTCTTCTCAAGCACTCTCTTCGTGAGTATCAACATATTGGCTTGGATTGGCTTGTTACAATGTATGAGAAGAGACTTAATGGGATACTGGCTGATGAAATGGGGCTTGGGAAGACAATTATGACAATTGCTTTGCTTGCACACCTAGCATGTGAAAAGGGAATATGGGGGCCTCATCTCATTGTGGTGCCGACTAGTGTCATGCTGAACTGGGAAACTGAGTTTCTTAAGTGGTGTCCTGCTTTTAAAATTCTTACTTACTTTGGAAGTGCCAAAGAGCGGAAATTTAAGAGACAAGGTTGGTTAAAACCAAACTCTTTCCATGTCTGCATAACCACTTACAGACTTGTTATACAAGATTCAAAAGTTTTCAAGCGGAAGAAGTGGAAATATTTGATTCTGGATGAAGCCCATCTGATTAAAAATTGGAAGTCCCAAAGATGGCAAACTCTTTTAAACTTCAATTCAAAACGGCGCATCTTATTGACTGGTACACCACTGCAGAATGATCTCATGGAACTCTGGTCTCTAATGCATTTCTTGATGCCCCACATCTTTCAATCTCATCAAGAATTCAAAGATTGGTTCTGTAATCCAATATCTGGAATGGTAGAGGGGCAAGAAAAAGTAAACAAAGAAGTCATTGACCGTCTCCATAATGTCCTTCGTCCTTTCCTACTCCGTCGATTGAAAAGGGATGTGGAGAAGCAGCTCCCCATGAAATTTGAACATGTCATATACTGTAGGCTCTCTAAGAGGCAGCGTAACTTGTATGAAGACTTCATTGCCAGTTCAGAGACACAAGCTACTCTAGCCAGTGCCAACTTCTTTGGGATGATTAGTGTCATAATGCAACTGCGCAAAGTTTGCAATCATCCTGATTTATTTGAGGGCCGTCCAATTGTAAGTTCTTTTGATATGGGCGGTATTGACATCCAATTGAGTTCTTCTGTTTGTTCAATGCTTTCACCTGGCCCATTTTCTACTGTAGACCTTAGGGATTTGGGGTTCTTATTTACTCATCTCGATTTCAGCATGGCTTCTTGGGAGAGCGATGAAGTTCAGGCTATTGCTACACCAACGAGCTTAATCAAGGGGCGTGCTGACCCTGATAATCTTGCAGAGATTGGTTTTGGATTCAAACATCAGAGAAAATCCCAGGGAACAAATATTTTTGAAGAGATCAGAAAGGCAATTTTGGAGGTGAGACTGACAGAAGCAAAGGAACGGGCAGCATCTATTGCATGGTGGAATTCCTTGAGGTGTCGTAAGAAACCCATGTACTCAACAACCCTACGGGATCTTGTCACAGTAAAGCATCCTGTTCATGATATCCATCGTCAAAAGAGTGACCGTTTATCATACATGTACTCCTCTAAGCTTGCTGACATTGTCCTGTCCCCTGTTGAACTCTTCAAGAGAATGATTGGTCAGGTTGAATGCTTCATGTTTGCAATCCCTGCAGCACGGGCACCAACACCTGTTTGTTGGTGCAGTAAAACCAATCATTCTGTGTTTCTCCAGCCAACATATAAGGAAAAATGCACTGAAACTTTGTCACCCCTTCTATCGCCTATTAGACCTGCAATTGTCCGCAGGCAAGTGTATTTCCCTGACAGGCGACTCATACAATTTGACTGTGGAAAGCTGCAAGAGCTTGCGGTTTTGCTAAGGAAACTGAAATCAGAAGGCCACCGAGCATTAATATTTACTCAAATGACAAAGATGCTTGATGTCTTGGAGGCTTTTATTAATTTGTATGGCTACACTTACATGCGGTTGGATGGATCTACTCAGCCAGAGGAGAGGCAAACACTAATGCAGAGGTTTAATACCAATCCTAAAATTTTTATTTTTATCTTGTCCACCCGTAGTGGTGGTGTTGGTATTAATCTGGTGGGGGCAGATACAGTTATCTTCTATGATAGTGACTGGAATCCAGCTATGGATCAACAAGCTCAAGATCGATGCCATCGAATAGGACAGACACGTGAAGTGCATATATATCGGTTAATTAGTGAGAGCACCATTGAAGAGAACATCTTAAAGAAAGCGAATCAAAAGCGTGCTCTTGATGATCTAGTCATACAGAGTGGAGGATACAACACTGAATTTTTCAAGAAATTAGATCCTATGGAACTGTTCTCAGGTCACAGGGCACTTCCAAATAAGAATATGCAGAAGGAGAAAAATCATAACATTGGAATTGAGGGTTCTGTATCTGTTGCAGATGTAGAGGCTGCTTTGAAGTATGCAGAAGATGAAGCGGATTATATGGCATTGAAGAAAGTTGAACAGGAAGAGGCTGTGGAAAACCAGGAATTCACGGAAGATGCCATTGGGAGAGTAGAAGATGATGAGTTAGTGAATGAGGATGATATGAAGCCTGATGAGGCTGTGGAGCAGGTTGGCTGTACTACTTCAAGTAAAGACAGTGGATTGATGTTAATTGGGAGTGATCCAAATGAAGAGAGAGCTCTCACTTTTGCTGGTAAAGAAGATGATGTTGATATGCTGGCTGATGTCAAACAGATGGCTGCAGCAGCAGCCGCTGCTGGACAAGCAATCTCATCATTTGAGAGTCAACTTCGTCCAATTGATCGATATGCGATACGTTTCCTGGAGTTATGGGACCCAATCATAGACAAGGCAGCAATGGAATCTCAAGCTACATTTGAGGAGGCAGAATGGGAACTAGATCGGATTGAAAAGTTTAAGGAGGACATGGAAGCTGAAATTGACAATGATGAGGAGCCTTTTGTATATGAAAGATGGGATTCTGATTTTGCAACTGAGGCATACCGACAGCAAGTTGAGGCCTTGGCTCAACACCAGTTGATGGAAGAACTGGAATGTGAAGCTAAAGAAAAGGATGATGCAGATGACGAAAATAATGGTTCTACGAGGAATGATATGGCAAGTGATCCTAAACCCAAGTCAAAGAAGAAACCAAAGAAAGCCAAGTTCAAATCTCTGAAGAAAGGATCTTTAGCTTCTGATTCTAAAGCTGTGAAAGAAGAGCCATTGATGGAACCTATGTCCATAGATGATGAAGATATTTTCCACGGGATGGTCACATTTTCAGACATGATGTCATCACATTCAAGTATGCAGAAAAAGCGTAAAAAGGCTGAAGCAACGGCAGATGGTGAAGAAGATAGGATCATGAAGAAGAGGTCTAAGAAGTTCAAGAAGGCTCCTGAAATAGGTCCTTTAAGTTTTGAAACCAACTTGTCAAATAAGCAGCATGATGAATCTAAAGAATCAAACCCATGTGAGAGTGCTGTTGTTGATCTTGAGCTTAAGTCAGCAAGCAGGGGTAAGATGGGAGGAAAAATCTCCATAACTGTCATGCCAGTGAAGCGGATTCTAATGATCAAACCAGAGAAGTTAAAGAAGGGAAACATTTGGTCAAGAGACTGTGTTCCATCTCCTGATTTTTGGTTTCCGCAAGAGGATGCAGTATTATGTGCTGTTGTACATGAATATGGCCCACATTGGAGCTTGGTGAGTGAAACACTGTATGGGATGACTGCTGGTGGGTTTTACAGGGGGAGATATCGCCATCCTGTCCATTGCTGTGAGAGATTTCGAGAACTCGTCCAAAGATATGTTTTATCTGCACCTGAAAATCCCAATAATGAGAAGGTCAGCAATACTGGCTCTGGAAAGGCTCTTCTCAAAGTAACAGAGGATAACATTCGAATGTTACTAGATGTTGCTATTGACCTGCCAGATAGTGAGTTACTTCTTCAGAAACACTTCACTGCCCTGCTTACTTCTGTCTGGAGGATGACATCCCGTGTTCATCACCGTCAAAACCACCTACCTTATCGAAATGGGCAGTATTCTACTGGAAGGTTTTTCAGTTCTACTGTCAACCAAATTTCTTGGAATTCCGTCAGGGAACCAACAGAAAGGACGAACTGGAATAATTTTGGTTACAGTAGCAGCAGGTTAGTAGCAGCTGCTCTCCATGATGCAAACAATAAACAACATGATGACTCAGCCTTCCTATCTAACCGAAGGGAGGAAGTCTCAACTGTTCCAGAGCAGCTGGAAATAAGGCTGGAAATTGAGAGAGATTTCTGTGATTCCATGATTCCCTTGCCATCTGTCATAAATTTATCAATATTGGGCTCAGAGCCACCATCAGCTGTCAACAACCCTATAGAAGAAAGTCAGATTCTCAAGTCTTCACAGGATATGGCTGAGAACCGTTTCAGGGCCGCATCAAGAGCTTGTTTTGATGGTACTCTGGATTGGGCTTCATCAGCCTTCCCAACAAGTGATATTAAGCCGAGATCTGCAATAAAATCACATTCCTTGGGAAAGCACAAAATCTGTACCTCTGACTCTATCAGGCCTTCTAAATCAAAGTTCAAAAAGGTTGCAGTTGAGCCTAGTGAGATGCACCACCTTATTTTGTCACCACTACCGAAGCCAACAGTTGCATTCAATGATTCCAATCCAAGGTTTGATCTGGGATCACCCGTGAGTTTGGACGCTGGTATCTCCACTCCTTCCTTCAATGAGGAGCTTTGTTGGGAACCTGAGAGTTTGGAGCTGTTCTCGCATCACTATTCTCCTAACCTCATCTCGGACCTTGATGATTTTTCATTGTTGCCAGAATATATCGACATTGGGTAG | 6150 | 0.4265 | MASKGPRSKLDHETRARRQKALEAPREPRRPKTHWDHVLDEMVWLSKDFESERKWKLAQAKKVALRASKGMLDQATRGEKRVKEEEQRLRKVALTISKDVKKFWIKIEKLVLYKHQMELDEKKKKALDKQLEFLLGQTERYSTMLAENLADTYQPTQQYLPKERCSIQYKEVDDPGFKEVPQSGIADVDEDYDMQSEEELEDDEHTIEEDEALITEEERQEELEALHNEIDLPLEELLKRYAMKKVSSGSSQDKDEEEAEPTSVGDDHFGGEGQDLSDTCKIDKNSSLTVIGRRCGESNGSLSISEHHLLEVDTCQAKNVSEISRESDEESKVYDFNDEQEDGDFVLATGEEKDDETTLLEEEELAKEESNDPIDEIALLQKESEIPLEELLARYKKDADEDVEDDSDYASASEDFLDSPAHQDTELNQQPGCVDDDDDEPGGRQPFVQSVTEEHAEGSEKQSDEARESENRIADAAAAARSAQPTGNTFSTTKVRTKFPFLLKHSLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIALLAHLACEKGIWGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKERKFKRQGWLKPNSFHVCITTYRLVIQDSKVFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHIFQSHQEFKDWFCNPISGMVEGQEKVNKEVIDRLHNVLRPFLLRRLKRDVEKQLPMKFEHVIYCRLSKRQRNLYEDFIASSETQATLASANFFGMISVIMQLRKVCNHPDLFEGRPIVSSFDMGGIDIQLSSSVCSMLSPGPFSTVDLRDLGFLFTHLDFSMASWESDEVQAIATPTSLIKGRADPDNLAEIGFGFKHQRKSQGTNIFEEIRKAILEVRLTEAKERAASIAWWNSLRCRKKPMYSTTLRDLVTVKHPVHDIHRQKSDRLSYMYSSKLADIVLSPVELFKRMIGQVECFMFAIPAARAPTPVCWCSKTNHSVFLQPTYKEKCTETLSPLLSPIRPAIVRRQVYFPDRRLIQFDCGKLQELAVLLRKLKSEGHRALIFTQMTKMLDVLEAFINLYGYTYMRLDGSTQPEERQTLMQRFNTNPKIFIFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKKANQKRALDDLVIQSGGYNTEFFKKLDPMELFSGHRALPNKNMQKEKNHNIGIEGSVSVADVEAALKYAEDEADYMALKKVEQEEAVENQEFTEDAIGRVEDDELVNEDDMKPDEAVEQVGCTTSSKDSGLMLIGSDPNEERALTFAGKEDDVDMLADVKQMAAAAAAAGQAISSFESQLRPIDRYAIRFLELWDPIIDKAAMESQATFEEAEWELDRIEKFKEDMEAEIDNDEEPFVYERWDSDFATEAYRQQVEALAQHQLMEELECEAKEKDDADDENNGSTRNDMASDPKPKSKKKPKKAKFKSLKKGSLASDSKAVKEEPLMEPMSIDDEDIFHGMVTFSDMMSSHSSMQKKRKKAEATADGEEDRIMKKRSKKFKKAPEIGPLSFETNLSNKQHDESKESNPCESAVVDLELKSASRGKMGGKISITVMPVKRILMIKPEKLKKGNIWSRDCVPSPDFWFPQEDAVLCAVVHEYGPHWSLVSETLYGMTAGGFYRGRYRHPVHCCERFRELVQRYVLSAPENPNNEKVSNTGSGKALLKVTEDNIRMLLDVAIDLPDSELLLQKHFTALLTSVWRMTSRVHHRQNHLPYRNGQYSTGRFFSSTVNQISWNSVREPTERTNWNNFGYSSSRLVAAALHDANNKQHDDSAFLSNRREEVSTVPEQLEIRLEIERDFCDSMIPLPSVINLSILGSEPPSAVNNPIEESQILKSSQDMAENRFRAASRACFDGTLDWASSAFPTSDIKPRSAIKSHSLGKHKICTSDSIRPSKSKFKKVAVEPSEMHHLILSPLPKPTVAFNDSNPRFDLGSPVSLDAGISTPSFNEELCWEPESLELFSHHYSPNLISDLDDFSLLPEYIDIG* | 2050 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vvi8g1419 | 2049 | Coils | Coil | 1392 | 1412 | - | - | |
| Vvi8g1419 | 2049 | FunFam | Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 | 1014 | 1268 | - | - | |
| Vvi8g1419 | 2049 | MobiDBLite | consensus disorder prediction | 244 | 281 | - | - | |
| Vvi8g1419 | 2049 | SMART | ultradead3 | 503 | 696 | IPR014001 | - | |
| Vvi8g1419 | 2049 | MobiDBLite | consensus disorder prediction | 1454 | 1478 | - | - | |
| Vvi8g1419 | 2049 | Gene3D | - | 753 | 814 | - | - | |
| Vvi8g1419 | 2049 | PANTHER | HELICASE SRCAP-RELATED | 15 | 1942 | - | - | |
| Vvi8g1419 | 2049 | Gene3D | - | 476 | 752 | IPR038718 | - | |
| Vvi8g1419 | 2049 | MobiDBLite | consensus disorder prediction | 172 | 208 | - | - | |
| Vvi8g1419 | 2049 | Gene3D | - | 1020 | 1268 | IPR027417 | - |
Showing 1 to 10 of 41 entries
Duplication type information
Functional genes information
Transcription factors information
Pathway information