Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g1410 ATGCTCATGGCGGACTCATTCAGTACCAAAACCGCACAAGATGATGACAATGAGGATGAAGACTACATGGGAGATCTCTCTCAGTTCATTCCACCTGAAACCGCTCAACCCCCAAAAGCTCAATTCAAGAAGATGTCGAACAACAAAGTCGTAGTTTCTCAATCACCATGGAAGCAATCGAAAGCCCTAAATTGGCAAGAACAGAGGAGAGTCTCAAGAGAGCGGCAGCGACGAGAAGAGGACTTGCGGACCCTAGCGAATACGGAGGCTCCGATTCCACAATCGAACATCGGGTTCAAAATGTTGAAACAAATGGGCTACACCCCGGGTTCGGCACTGGGGAAGGAGGGCTCGGGCCGAGCAGAGCCAGTGGGGCTCGAGATAAGACGAACGCGAGCAGGGATTGGAAGAGAGGATCCCATTAAGGAGAAGATGAGGAGAGAAGAGGCTTGGACTGAGAAGAAGAGGAAGAACGAGGCTGCTTTAATGGCGGAGTTCGGGTGTAGGCAGAAGTCGCAATGGCAGAGTCGGAGAGTTGTAGTGAATTTCAAGAAGGCGAAAGGTGCTCTTGATCAGTTGGAGAATAAGGAAATTGTGGAGCCCAAGAAGAAGGAAGATGAGGACAGTGAGGAAGGTGAAGAGGAGGAAGAAGAGGAGGAGATTACAGAAGAGGATTTGCAAAATATATTGATGAAACTGAGAGACGAATTTCGATACTGCCTCTTCTGTGGATGTCAGTATGAGTCGGTTGAAGCTCTACTGTCCAACTGCCCTGGACCAAATGAAGATGACCACTGA 798 0.49 MLMADSFSTKTAQDDDNEDEDYMGDLSQFIPPETAQPPKAQFKKMSNNKVVVSQSPWKQSKALNWQEQRRVSRERQRREEDLRTLANTEAPIPQSNIGFKMLKQMGYTPGSALGKEGSGRAEPVGLEIRRTRAGIGREDPIKEKMRREEAWTEKKRKNEAALMAEFGCRQKSQWQSRRVVVNFKKAKGALDQLENKEIVEPKKKEDEDSEEGEEEEEEEEITEEDLQNILMKLRDEFRYCLFCGCQYESVEALLSNCPGPNEDDH* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g1410 265 SMART G-patch_5 92 138 IPR000467 GO:0003676
Vvi8g1410 265 Pfam G-patch domain 94 137 IPR000467 GO:0003676
Vvi8g1410 265 MobiDBLite consensus disorder prediction 110 154 - -
Vvi8g1410 265 ProSiteProfiles G-patch domain profile. 94 140 IPR000467 GO:0003676
Vvi8g1410 265 MobiDBLite consensus disorder prediction 207 224 - -
Vvi8g1410 265 MobiDBLite consensus disorder prediction 194 224 - -
Vvi8g1410 265 SMART DUF4187_2 211 265 IPR025239 -
Vvi8g1410 265 Coils Coil 216 236 - -
Vvi8g1410 265 MobiDBLite consensus disorder prediction 122 154 - -
Vvi8g1410 265 MobiDBLite consensus disorder prediction 40 66 - -
Vvi8g1410 265 PANTHER UNCHARACTERIZED 17 265 IPR039249 -
Vvi8g1410 265 MobiDBLite consensus disorder prediction 67 85 - -
Vvi8g1410 265 MobiDBLite consensus disorder prediction 1 89 - -
Vvi8g1410 265 Pfam Domain of unknown function (DUF4187) 213 265 IPR025239 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi8g1410 86 139 C2H2 Transcription Factor Family AT5G26610 38.889 1.78e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g1410 - - vvi:100246967 476.863