Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g1405 ATGGCCGGGCTTTGTTGTTGTATGCCACTCTCATCTCGAAGCAATTTCCGGACTTCAAGATTGATGTTGGAGACTCGCCATGGAAGGACTATGGTGGGGAAGTCACTTGGCAGAAGAAACCTCCAAATTAAGGCAGAAGTGAATTTTGTTAATGCTGAAGAAGGCAAGAAACTTATAGCAGTTGAGGGATATGCAATTCTGGACGTGCGAGACAAATCTCAATATGATCGAGCTCATATAAAGTCATGTTATCATGTTCCTCTATTTATCGAAAACCAGGACAATGACTTGGGCACAATTATAAAGAGGACTGTGCACAACAATTTTTCTGGCTTGTTCTTTGGATTACCATTCACTAAAGTGAATCCTGACTTTGTACAGTCTGTTAAGAGCCAGTTTTCCCCCGAAAGCAAACTACTACTTGTCTGTCAGGAAGGATTGAGGTCTGCTGCAGCTGCTAGTAAGTTAGAGCAAGCCGGTTTTGCCAACATTGCATGTATAACATCAGGGCTTCAAACCGTAAAACCAGGAATGTTTGATTCTGTTGGATCCACTGAGTTGCAAGATGCTGGCAAAGCCGGTCTGGTTACCATTCAAGGCAAAATATCAGCTGTACTTGGAACTGTACTTATATGTGCATTTCTTTTCATTACCTTCTTTCCTGAGCAAGCAGAGAAGTTACTTCAAATGGCTCCTTCAGGCTAG 705 0.4241 MAGLCCCMPLSSRSNFRTSRLMLETRHGRTMVGKSLGRRNLQIKAEVNFVNAEEGKKLIAVEGYAILDVRDKSQYDRAHIKSCYHVPLFIENQDNDLGTIIKRTVHNNFSGLFFGLPFTKVNPDFVQSVKSQFSPESKLLLVCQEGLRSAAAASKLEQAGFANIACITSGLQTVKPGMFDSVGSTELQDAGKAGLVTIQGKISAVLGTVLICAFLFITFFPEQAEKLLQMAPSG* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g1405 234 Pfam Rhodanese-like domain 52 172 IPR001763 -
Vvi8g1405 234 FunFam Rhodanese-like domain-containing protein 9, chloroplastic 37 179 - -
Vvi8g1405 234 Gene3D - 47 179 IPR036873 -
Vvi8g1405 234 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 9, CHLOROPLASTIC 1 232 IPR044615 -
Vvi8g1405 234 SMART rhod_4 50 180 IPR001763 -
Vvi8g1405 234 CDD RHOD 56 175 - -
Vvi8g1405 234 ProSiteProfiles Rhodanese domain profile. 60 183 IPR001763 -
Vvi8g1405 234 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 45 172 IPR036873 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi8g1405 1 228 Sulfurtransferasese or Rhodanese AT2G42220 69.565 2.00e-118 335
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g1405 - - vvi:100241760 463.766