Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g1274 ATGGCTCGGAGTATTTCTTACATAACTGGTTCGCAGCTTCTAGCCCTCAAACGTCGCCCTAATATTGCTATTGTCGATGTCCGGGACGATGAGAGGAGTTACGATGGACACATAGCCGGGTCTCTGCACTATGCGAGCGACACCTTTTCTGATAAGATCTCTAATCTGGTTCAAGAGGTCAAAGGGAAGGACACCCTGGTCTTCCATTGCGCCTTAAGTCAGGTTCGTGGTCCAACTTGTGCACGAAGGCTTGCAACCTATCTCACAGGGGTGGAGAATGAGGAAATAAAGAACATTCTTGTCTTGGAACGTGGCTTCAATGGTTGGGAAGCTTCTGGTAGACCTGTTTGTCGTTGCACTGGCATCCCCTGTAAGGGCGACAATGCACAGTGA 393 0.4936 MARSISYITGSQLLALKRRPNIAIVDVRDDERSYDGHIAGSLHYASDTFSDKISNLVQEVKGKDTLVFHCALSQVRGPTCARRLATYLTGVENEEIKNILVLERGFNGWEASGRPVCRCTGIPCKGDNAQ* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g1274 130 Pfam Rhodanese-like domain 12 111 IPR001763 -
Vvi8g1274 130 SMART rhod_4 8 115 IPR001763 -
Vvi8g1274 130 ProSiteProfiles Rhodanese domain profile. 18 118 IPR001763 -
Vvi8g1274 130 PANTHER M-PHASE INDUCER PHOSPHATASE DUAL SPECIFICITY PHOSPHATASE CDC25 5 123 - -
Vvi8g1274 130 Gene3D - 1 129 IPR036873 -
Vvi8g1274 130 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 3 125 IPR036873 -
Vvi8g1274 130 FunFam Dual-specificity phosphatase CDC25 1 129 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi8g1274 1 75 Sulfurtransferasese or Rhodanese AT5G03455 82.667 3.73e-41 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g1274 K18065 - vvi:100260619 266.544