Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g1269 ATGGGGATGGCTGAGTTCAGTGGTGGTGGTGGGGGGAGAGGGATGAGGAGATTCGGTTTGCAAGTGCTTGTGGGGCGATGGTTCATGGTCTTTGCTTCACTCCTGATCATGTCTGTTGCAGGTGCAACTTACATGTTCAGTCTGTACTCGGGTGAAATAAAAACGTCACTGGGTTATGATCAGACCACCCTTAATTTGCTGAGCTTCTTCAAGGACCTGGGTGGCAATGTTGGGGTTCTCTCGGGCCTCATCAACGAGGTCACGCCACCTTGGGTGGTTCTCTGTATTGGCGCTGTTATGAACTTTTTTGGGTATTTCATGATCTGGCTCGCCGTCACCGACCGCATTGCCAAACCCCAGATATGGCAGATGTGTCTTTACATATGCATCGGCGCCAATTCCCAATCATTCGCCAATACCGGAGCGTTGGTTACTTGTGTTAGGAACTTCCCTGAAAGCAGAGGTATTGTTTTGGGCCTTCTGAAGGGATTTGTTGGTCTGAGTGGTGCTATCATCACACAACTCTACCGTGCTTTCTACGGAGATGATTCCAAATCTCTTATTCTATTCATTGCTTGGCTTCCGGCTGCAGTCTCCTTCGTGTTTCTTCGGACAATCAGGATCATGAAAGTAGGTCGGCAAGCAAACGAGCTCAAGGTTTTCTATGATCTTCTCTATATGTCTCTCGGCCTCGCCGGGTTTCTCATGGTTATAATCATAATACAAAACAAGTTTACCTTCTCCAGAATCGAGTATAGTGGAAGTGCTGCTGTCGTTCTTATCCTACTCTTTCTTCCGCTTGCTGTAGTCATCAAAGAGGAAATCAACATCTGGAAGGGTAAGAAACAAGCCTTGGACGCCGCCCAGGTGAAAGTAATTACTGAAAATCCACCTGCGGTTGAGCTAGCATCATCCCCTGTGGTGTCACTGGATCAGCTTCCACCACCCACTGCAGCTCCAGAAAATGCAGAGAAATCAGTTTCTTGTTTCAAAACCATGTTCAAGCCACCAGACAGAGGCGAGGACTACACCATTCTACAAGCGCTGTTCAGCATTGATATGTTGATTCTGTTCATTGTCACCACATGTGGAGTCGGAGGAACACTAACTGCTATCGACAATTTGGGGCAGATTGGCAGTTCACAGGGCTACACGGCCCACAGCACCACCACCTTCGTATCCCTCGTCAGCATATGGAATTATCTGGGTCGAGTCGTGTCTGGCTTCGCTTCCGAAATATTCTTGACAAGATACAAATTCCCCCGTCCGCTGATGCTAACTTTTGTTCTTCTTTTCTCTTGTGTTGGCCATCTTCTCATCGCCTTCGCCGTCCCCAACTCTCTTTACTTCGCCTCAGTGATCATCGGCTTCTGCTTTGGAGCCCAGTGGCCACTAGTGTTCGCCATCATATCAGAATTATTTGGCCTTAAATACTACTCCACTTTGTACAATTTCGGAGCCGTGGCAAGTCCGGTCGGGTCGTATATCCTCAACGTCAAAGTAGCCGGGCATCTCTACGACAAGGAAGCTTTGAAGCAACTGGAAGCTTCAGGTGTTACTAGGGTTGCTGGGCAGGACTTGACTTGCACAGGCGCTGCGTGTTACAAACTGTCTTTTATCATAATCACAGCAGCCACACTATTTGGGTGCATTATTTCCTTCATTTTAGTGATCCGGACCAAAAAGTTTTACCAAGGCGATATCTACAAGAAGTTCAGACAAGAAGCCAATAAAGCTGAGATTAACATGGCTTCCTCCGGAAACGGCATTCTACAATTGGGAGAAACAGAATCCAAGGCTACTGTCACTGCCACCGCCACAGCCACAGAAGACACCACCACTACCATGGACCAGCCAACACAAATTTGTAGAGATGGTTTAGAGAGAAGCAACAGCAAGCACATTAATCAAAGCCAATTGGAGAGGCTTCCTATGGTGACATCCAATCTGTTTACAGCTCTTGCTTCACCTCCAACCCGTTGGCAGTAA 1989 0.4761 MGMAEFSGGGGGRGMRRFGLQVLVGRWFMVFASLLIMSVAGATYMFSLYSGEIKTSLGYDQTTLNLLSFFKDLGGNVGVLSGLINEVTPPWVVLCIGAVMNFFGYFMIWLAVTDRIAKPQIWQMCLYICIGANSQSFANTGALVTCVRNFPESRGIVLGLLKGFVGLSGAIITQLYRAFYGDDSKSLILFIAWLPAAVSFVFLRTIRIMKVGRQANELKVFYDLLYMSLGLAGFLMVIIIIQNKFTFSRIEYSGSAAVVLILLFLPLAVVIKEEINIWKGKKQALDAAQVKVITENPPAVELASSPVVSLDQLPPPTAAPENAEKSVSCFKTMFKPPDRGEDYTILQALFSIDMLILFIVTTCGVGGTLTAIDNLGQIGSSQGYTAHSTTTFVSLVSIWNYLGRVVSGFASEIFLTRYKFPRPLMLTFVLLFSCVGHLLIAFAVPNSLYFASVIIGFCFGAQWPLVFAIISELFGLKYYSTLYNFGAVASPVGSYILNVKVAGHLYDKEALKQLEASGVTRVAGQDLTCTGAACYKLSFIIITAATLFGCIISFILVIRTKKFYQGDIYKKFRQEANKAEINMASSGNGILQLGETESKATVTATATATEDTTTTMDQPTQICRDGLERSNSKHINQSQLERLPMVTSNLFTALASPPTRWQ* 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g1269 662 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 27 569 - -
Vvi8g1269 662 CDD MFS_Mch1p_like 25 550 - -
Vvi8g1269 662 SUPERFAMILY MFS general substrate transporter 27 565 IPR036259 -
Vvi8g1269 662 Gene3D MFS general substrate transporter like domains 347 564 IPR036259 -
Vvi8g1269 662 FunFam Nodulin family protein 345 566 - -
Vvi8g1269 662 Pfam Nodulin-like 26 271 IPR010658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi8g1269 Vvi-Chr8 18809519 18811698 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi8g1269 12 575 Nodulin-like Gene Family AT2G39210 71.429 0.0 826
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g1269 - - vvi:100248651 1210.67