Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g1217 ATGGAACTCTCACTTCTCTCTGGTCACCAACTCAACCCCACTCTTCTCCACAAGAATTTCAGCCCCCTTCCCATTACAAGGAAGAGGTCCTTCAAGAGGAATTCATCTGTGTTGTTTTGTCAATGCTCGTTCTCGTCCTCAGATGATTCTGCAAAACCAGCAACCCTATCTTTACAGCGTGAGGGAAGGAGGGCATTGATGGGTTGTGTTCTTGTAGCAGCTGCTGGAATTTATGTCTGTGATGTGGCTGGCGCTGTTAGCACGAGTAGAAGAGCTCTTAGAGGAGCAAAAATACCTGAGAGTGACTACACAACTCTTCCCAATGGTCTGAAGTACTATGATTTGAAGGTTGGGGGTGGACTTAAGGCTGTGAAGGGATCTCGGGTTGCAGTCCACTATGTTGCTAAGTGGAAGGGCATCACCTTTATGACAAGTAGACAAGGACTTGGTGTTGGAGGTGGAACGCCTTATGGATTTGATGTAGGTCAATCTGAGAGGGGATCCGTTCTCAAAGGATTAGACCTAGGTGTTGAAGGCATGAAAGTAGGAGGCCAGCGATTACTAATTGTTCCTCCTGAGCTAGCATATGGAAGTAAAGGAGTCCAGGAAATCCCTCCAAATGCAACAATTGAGTTGGATGTTGAGCTTCTGGCCATCAAACAAAGCCCACTTGGGACTGGTGTAAAAATTATTGAAGGATAA 702 0.4615 MELSLLSGHQLNPTLLHKNFSPLPITRKRSFKRNSSVLFCQCSFSSSDDSAKPATLSLQREGRRALMGCVLVAAAGIYVCDVAGAVSTSRRALRGAKIPESDYTTLPNGLKYYDLKVGGGLKAVKGSRVAVHYVAKWKGITFMTSRQGLGVGGGTPYGFDVGQSERGSVLKGLDLGVEGMKVGGQRLLIVPPELAYGSKGVQEIPPNATIELDVELLAIKQSPLGTGVKIIEG* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g1217 233 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 122 217 IPR001179 GO:0003755
Vvi8g1217 233 Gene3D - 86 224 IPR046357 GO:0003755
Vvi8g1217 233 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 126 220 IPR001179 GO:0003755
Vvi8g1217 233 SUPERFAMILY FKBP-like 98 220 - -
Vvi8g1217 233 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 100 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi8g1217 Vvi-Chr8 18294878 18298726 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi8g1217 126 220 Calmodulin-binding Proteins AT5G48570 45.361 1.33e-16 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g1217 - - vvi:100260611 444.506