Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g1198 ATGGCCTCTCATACAGAGTGTGTGAGATGTAACATCTCTAACATTGTGAAGCTCAGAAGGACTTGCATGTGGCGGAAACCGGGCAGTGGTGGTGGAAAGAAACCGCCCCGAGATGTTCCGCCAGGCCACGTAGCAGTGACAGTAGGCGAAGCTAGGAGGAGGTTTGTTATAAGGGCTGACTACTTGAACCACCCACTTCTCCAGCAGCTGCTAGACCAGGCTTATGAAGAGTACGGTCAGAGTAAGGAGGGTCCTCTGGCTATACCCTGTGATGAGTTTCTATTCCAGAATATCATCCATTCCCTTGCAAGCCAGTTCTCTTGCAATGTGAACGAGAAGAAGTTGGTGCTGAGCTTGTGGAAGGACTCCGGACCACTACTCAACGGCTTTTCAAGAGGATCAACGTGCTAG 411 0.5061 MASHTECVRCNISNIVKLRRTCMWRKPGSGGGKKPPRDVPPGHVAVTVGEARRRFVIRADYLNHPLLQQLLDQAYEEYGQSKEGPLAIPCDEFLFQNIIHSLASQFSCNVNEKKLVLSLWKDSGPLLNGFSRGSTC* 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g1198 136 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 25 98 IPR003676 GO:0009733
Vvi8g1198 136 Pfam Auxin responsive protein 23 102 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi8g1198 Vvi-Chr8 18138722 18139132 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi8g1198 12 99 Calmodulin-binding Proteins AT4G34750 53.846 9.15e-29 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g1198 K14488 - vvi:100242479 273.863