Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g1196 ATGGAGTATGAGATGGTGGGGATAGTAATAGCACTGGTGCTATGGGCAGTGTGGGCAATGGTGACGGAGCGGCGACACCGCCGTTTGGAAGAGCTGGGGCAGCTGCCACCAGGGCCAAGATCGTGGCCGGTGGTTGGCAACATCTTCCAATTGGGTTGGGCACCCCACGTATCTTTTGCTAAATTGGCTGGCAAGCACGGGCCCATCATGACTCTGTGGTTAGGTTCCATGAGCACCGTGGTGATTTCGTCGAATGAAGTGGCCAGGGAAATGTTTAAGAATCATGATGTGGTGCTTGCGGGGAGGAAGATTTATGAGGCCATGAAAGGGGACCGTGGAAACGAGGGTTCCATAATTACAGCTCAATATGGTCCCCAGTGGCGCATGCTGAGGCGCTTGTGCACCAGCGAGTTCTTTGTGACCAGCCGTCTGGATGCCATGCGTGGGGTACGTGGTGGGTGCATTGACCGTATGGTGCAGTTTGTGACCGAAGCAGGAACCTCAGGTACGCATGCCATCGATGTAGGGAGGTTCATTTTCTTGATGGCTTTCAATCTCATAGGCAATCTCATGTTCTCCAAGGATCTTTTGGATCCAAAATCGGAGAGAGGGGCGGAGTTTTTTTATCATGCAGGTAAAGTCATGGAGTTGGCAGGGAGGCCGAACGTGGCCGATTTTTTGCCAATTCTACGATGGTTTGATCCTCAAGGCATTAGGAGGAAGACCCAGTTCCATGTGGAACGAGCCTTTGCTATCGCTGGAGGCTTCATCAAAGAGAGGATGGAGACCATGGCCAAAGGAAGTGGTGAAGCGAAGAGCAAGGACTTCCTAGACGTGCTCTTGGAGTTCCGTGGAGATGGTGTGGAGGAGCCCTCTAGGTTCTCTTCCAGAACCATCAACGTTATCGTCTTTGAGATGTTCACGGCCGGGACTGACACCACCACGAGCACCTTGGAGTGGGCCATGGCAGAGCTCCTCCACACCCCACGTATACTAAACAAAGTCCAGGCTGAGCTGAGAAGCGTCGTCAAACCCGGTTCCAAGCTGGAGGAGAAGGACATGGAAAACCTCCCATACCTCATAGCAGTCATCAAGGAGACCCTGAGACTTCACCCACCTCTACCTTTCTTAGTCCCCCACATGGCAATGAACTCTTGCAAGATGCTAGGCTACTGCATTCCCAAAGAAACACAAGTGTTGGTTAACGTTTGGGCAATCGGACGCGACCCCAAGACCTGGAAAGACCCTTTAGTGTTCATGCCGGAGAGGTTCTTAGAGCCCAACATGGTGGACTACAAGGGACACCATTTTGAATTCATACCATTTGGGTCAGGCCGTCGAATGTGTCCTGCAGTTCCACTCGCTTCTCGTGTGCTCCCCTTGGCTCTAGGATCCCTCTTGCACTCCTTCAATTGGGTCTTACCGGATGGGCTCAATCCCAAAGAGATGGACATGACTGAAAGGATGGGAATAACACTGAGGAAATCTGTTCCATTGAGGGCCATGCCAGTACCATACAAGGGGATCCAAACTCAGATGGAGTGGACTACAAATTTTCTTGTTTGGTTGATTATCCCTTTCTTATCAGCACTGCTCTTGCTACTTCACCGGCTAAAGTCCGGCTTTAATAAGCATCTGCCACCGGGACCGCCGGGATGGCCAATTTTCGGAAATATTTTCGATCTGGGAACATTACCACACCAAAAACTTGCTGGCCTAAGAGACACGTATGGGGACGTCGTGTGGCTAAATTTAGGTTATATTGGGACGATGGTGGTTCAGTCCTCTAAGGCGGCCGCTGAACTGTTCAAGAACCATGACCTTTCTTTCTCGGACCGGAGCATCCACGAAACCATGCGAGTTCACCAATATAACGAATCCTCTTTGTCCCTGGCTCCATACGGTCCATACTGGCGCTCACTGAGACGTCTGGTGACCGTGGACATGCTGACCATGAAGCGAATCAACGAGACTGTCCCGATTCGTAGAAAATGCGTGGATGATTTGTTATTGTGGATAGAAGAGGAGGCACGGGGGATGGATGGAACGGCGACTGGTTTAGAGTTAGGTCGCTTCTTCTTCCTTGCCACATTCAACATGATCGGAAACCTTATGCTGTCACGAGACCTATTGGATCCGCAATCGAGGAAGGGGTCGGAGTTCTTTACAGCAATGCGCATATCGATGGAGAGCTCGGGCCATACCAACTTTGCTGATTTCTTTCCATGGCTTAAATGGTTGGACCCGCAGGGCTTAAAGAAAAGAATGGAGGTTGATCTTGGAAAATCCATAGAAATTGCTTCCGGCTTCGTTAAGGAGCGTATGAGACAAGGGCGAGCGGAGGAAAGCAAGAGGAAGGACTTCCTGGATGTGCTGTTAGAGTTTCAAGGTGATGGAAAGGATGAAGCAACTAAAATTTCCGAGAAGGGCATCAACATATTCATAACGGAAATGTTCATGGCTGCATCAGAAACCACTAGCAGCACCATGGAATGGGCTATGACTGAGCTCCTGCGCAGTCCTGAGTCCATGACTAAGGTTAAGGCAGAGCTTGGTCGAGTTATTGGAGAAAAAAGGAAGCTTGAAGAGAGCGACCTGGATGATCTCCCATATTTACATGCTGTGGTGAAAGAGACACTACGATTGCATCCTGCAGCTCCATTCCTAGTTCCACGAAGAGCAGTTGAAGATACTAAATTCATGGGGTACCACATACCCAAAGGCACGCAAGTATTCGTGAATGTTTGGGCAATTGGAAGGGAAGCCGAAACTTGGGATGATGCACTATGTTTTAAGCCAGAGAGGTTTGTAGACTCAAACATGGATTATAAGGGCCAAAATTTCGAGTTCATCCCATTTGGCGCAGGGCGAAGGATTTGCGTAGGAATTCCATTAGCCTATCGAGTGCTACACTTTGTGTTGGGGTCGCTGCTTCATCATTTTGACTGGCAACTTGAGCGTAATGTCACGCCAGAGACAATGGACATGAAAGAGAGGCGCGGAATCGTAATCTGCAAGTTTCATCCATTGAAAGCTAATCTTTCTCAATTTTTATATTCTTTTTTGAATGTTTGTGTCAACTTTTTGATAATGTACATAAAAATAGTTTCCAATAAAAAATATTCTCTAAATCCCTATAATTAA 3144 0.4873 MEYEMVGIVIALVLWAVWAMVTERRHRRLEELGQLPPGPRSWPVVGNIFQLGWAPHVSFAKLAGKHGPIMTLWLGSMSTVVISSNEVAREMFKNHDVVLAGRKIYEAMKGDRGNEGSIITAQYGPQWRMLRRLCTSEFFVTSRLDAMRGVRGGCIDRMVQFVTEAGTSGTHAIDVGRFIFLMAFNLIGNLMFSKDLLDPKSERGAEFFYHAGKVMELAGRPNVADFLPILRWFDPQGIRRKTQFHVERAFAIAGGFIKERMETMAKGSGEAKSKDFLDVLLEFRGDGVEEPSRFSSRTINVIVFEMFTAGTDTTTSTLEWAMAELLHTPRILNKVQAELRSVVKPGSKLEEKDMENLPYLIAVIKETLRLHPPLPFLVPHMAMNSCKMLGYCIPKETQVLVNVWAIGRDPKTWKDPLVFMPERFLEPNMVDYKGHHFEFIPFGSGRRMCPAVPLASRVLPLALGSLLHSFNWVLPDGLNPKEMDMTERMGITLRKSVPLRAMPVPYKGIQTQMEWTTNFLVWLIIPFLSALLLLLHRLKSGFNKHLPPGPPGWPIFGNIFDLGTLPHQKLAGLRDTYGDVVWLNLGYIGTMVVQSSKAAAELFKNHDLSFSDRSIHETMRVHQYNESSLSLAPYGPYWRSLRRLVTVDMLTMKRINETVPIRRKCVDDLLLWIEEEARGMDGTATGLELGRFFFLATFNMIGNLMLSRDLLDPQSRKGSEFFTAMRISMESSGHTNFADFFPWLKWLDPQGLKKRMEVDLGKSIEIASGFVKERMRQGRAEESKRKDFLDVLLEFQGDGKDEATKISEKGINIFITEMFMAASETTSSTMEWAMTELLRSPESMTKVKAELGRVIGEKRKLEESDLDDLPYLHAVVKETLRLHPAAPFLVPRRAVEDTKFMGYHIPKGTQVFVNVWAIGREAETWDDALCFKPERFVDSNMDYKGQNFEFIPFGAGRRICVGIPLAYRVLHFVLGSLLHHFDWQLERNVTPETMDMKERRGIVICKFHPLKANLSQFLYSFLNVCVNFLIMYIKIVSNKKYSLNPYN* 1048
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g1196 1047 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 953 962 IPR017972 GO:0005506|GO:0016705
Vvi8g1196 1047 CDD CYP76-like 63 503 - -
Vvi8g1196 1047 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 442 451 IPR017972 GO:0005506|GO:0016705
Vvi8g1196 1047 PRINTS P450 superfamily signature 874 885 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1196 1047 PRINTS P450 superfamily signature 960 971 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1196 1047 PRINTS P450 superfamily signature 309 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1196 1047 PRINTS P450 superfamily signature 951 960 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1196 1047 FunFam Cytochrome P450 76C4 27 502 - -
Vvi8g1196 1047 FunFam Cytochrome P450 76C4 538 1013 - -
Vvi8g1196 1047 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 10 505 - -
Vvi8g1196 1047 CDD CYP76-like 576 1012 - -
Vvi8g1196 1047 Pfam Cytochrome P450 36 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1196 1047 Pfam Cytochrome P450 547 1002 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1196 1047 SUPERFAMILY Cytochrome P450 547 1013 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1196 1047 PRINTS E-class P450 group I signature 361 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1196 1047 PRINTS E-class P450 group I signature 298 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1196 1047 PRINTS E-class P450 group I signature 318 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1196 1047 PRINTS E-class P450 group I signature 402 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1196 1047 PRINTS E-class P450 group I signature 439 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1196 1047 PRINTS E-class P450 group I signature 449 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1196 1047 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1196 1047 SUPERFAMILY Cytochrome P450 36 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1196 1047 Gene3D Cytochrome P450 536 1013 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1196 1047 Gene3D Cytochrome P450 20 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi8g1196 Vvi-Chr8 18101750 18121816 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi8g1196 4 508 Cytochrome P450 AT3G52970 65.844 0.0 671
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g1196 - - egt:105956739 1239.94