Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g1195 ATGGTCGACTGGGCTTCAAATATTCTTCTATGGTGTATCATCCTTGTAATCCCGGTTCTATTCCTCCTACTTCACAGAAGAAGGTCGGGTTCAGTACGGCTGCCTCCGGGACCGCCGGGATGGCCGGTTTTCGGGAACATGTTCGATCTGGGAGCAATGCCACACGAAACCCTTGCGGGGCTGAGACACAAGTACGGGGACGTTGTGTGGCTGAATTTAGGAGCTATAAAGACGACGGTGGTTCAGTCCTCTAAGGCGGCAGCTGAACTGTTCAAGAACCAGGACCTCTGTTTCTCGGACCGCACCATCACCGAAACCATGCGCGCTCAGGGGTACCATGAAAGCTCCTTGGCCCTGGCTCCATATGGCCCACACTGGCGCTCCTTGAGGCGTCTGATGACGATGGAGATGCTGGTTACAAAGCGGATCAACGAGACTGCCGGGGTACGTAGAAAATGTGTGGATGACATGTTGTCATGGATAGAAGAGGAGGCGCGTGGGGTGGGAGGAGAGGGGCGTGGAATTCAGGTGGCTCACTTCGTCTTTCTGGCGTCATTTAACATGCTGGGAAACCTGATGCTGTCATGTGACCTGCTGCATCCAGGATCCAAGGAGGGGTCGGAGTTCTTCGAGGTTATGGTCAGGGTTATGGAGTGGCCAGGCCATCCCAACTCTGCGGACTTTTTTCCATGGCTGAGATGGATGGACCCACAGGGCTTAAGGAAGAAGGCGGAGCGTGACCTTGGAATAGCCATGAAAATCGCTTCAGGATTTGTTCAAGAGCGGATAAAACGAGGGCCGGCTGCGGAGGACCATAAGAAGGACTTCCTGGATGTGTTACTTGACTTCCAAGGAAGTGGAAAGAATGAGCCACCTCAAATTTCAGATAAGGACTTGAACATCATCATTCTGGAAATATTCATGGCGGGATCGGAAACCACTAGCAGCACGGTTGAATGGGCACTGACGGAGCTCTTACGCCATCCCGAATGCATGGCGAAGGTTAAAGCTGAGCTTGGACGAGTTGTTGGAGCAAGCGGTAAGTTAGAAGAGAGGCACATTGATGATCTCCAATATTTACAGGCTGTCGTGAAGGAAACATTCAGGTTGCACCCTCCAATCCCATTTCTGGTTCCTCGGAAGGCAGTTCGAGACACCAATTTCATGGGATACCATATTCCCAAAAACACACAACTGTTTGTGAATGTTTGGGCCATCGGAAGGGAAGCGGAGTTGTGGGAGGAGCCTTCGTCCTTCAAGCCTGAGAGGTTTTTAGACTTAAACCATATTGATTATAAGGGTCAACATTTCCAGCTGATCCCCTTTGGAGCCGGTCGAAGGATGTGTGCGGGAGTTCCATTAGCTCATCGGATGGTGCACCTTGTTCTGGGGTCCTTGGTTTACCATTTTGACTGGCAACTTGACAGCAGTATCACTCTTGAGACCATGGACATGAGAGAGAATTTGGCCATGGTGATGAGGAAGTTGGAACCACTCAAGGCTCTACCCAAAAAAGTTTCTCTCTGA 1527 0.5102 MVDWASNILLWCIILVIPVLFLLLHRRRSGSVRLPPGPPGWPVFGNMFDLGAMPHETLAGLRHKYGDVVWLNLGAIKTTVVQSSKAAAELFKNQDLCFSDRTITETMRAQGYHESSLALAPYGPHWRSLRRLMTMEMLVTKRINETAGVRRKCVDDMLSWIEEEARGVGGEGRGIQVAHFVFLASFNMLGNLMLSCDLLHPGSKEGSEFFEVMVRVMEWPGHPNSADFFPWLRWMDPQGLRKKAERDLGIAMKIASGFVQERIKRGPAAEDHKKDFLDVLLDFQGSGKNEPPQISDKDLNIIILEIFMAGSETTSSTVEWALTELLRHPECMAKVKAELGRVVGASGKLEERHIDDLQYLQAVVKETFRLHPPIPFLVPRKAVRDTNFMGYHIPKNTQLFVNVWAIGREAELWEEPSSFKPERFLDLNHIDYKGQHFQLIPFGAGRRMCAGVPLAHRMVHLVLGSLVYHFDWQLDSSITLETMDMRENLAMVMRKLEPLKALPKKVSL* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g1195 508 PRINTS E-class P450 group I signature 402 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1195 508 PRINTS E-class P450 group I signature 439 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1195 508 PRINTS E-class P450 group I signature 449 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1195 508 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1195 508 PRINTS E-class P450 group I signature 361 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1195 508 PRINTS E-class P450 group I signature 298 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1195 508 PRINTS E-class P450 group I signature 318 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1195 508 CDD CYP76-like 62 503 - -
Vvi8g1195 508 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 12 505 - -
Vvi8g1195 508 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 442 451 IPR017972 GO:0005506|GO:0016705
Vvi8g1195 508 Pfam Cytochrome P450 35 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1195 508 FunFam Cytochrome P450 76C4 26 502 - -
Vvi8g1195 508 Gene3D Cytochrome P450 28 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1195 508 SUPERFAMILY Cytochrome P450 26 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1195 508 PRINTS P450 superfamily signature 440 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1195 508 PRINTS P450 superfamily signature 449 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1195 508 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1195 508 PRINTS P450 superfamily signature 309 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi8g1195 Vvi-Chr8 18099069 18101173 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi8g1195 8 503 Cytochrome P450 AT3G52970 43.654 1.09e-141 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g1195 K22983 - vvi:100263228 1029.24