Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g1193 ATGGAGGTCACATGCTTCCTTGAAGGCATCATGGCCGACTGGGCTTCAAATATTCTTCTATGGTGTATCATCCTTGTAATCCCGGTTCTATTCCTCCTACTTCGCAGGAGAAGGTCGGGTTCAGTACGGCTGCCTCCGGGACCGCCGGGATGGCCGGTTTTCGGGAACATGTTCGATCTGGGAGCAATGCCACACGAAACCCTTGCGGGGCTGAGACACAAGTACGGGGACGTTGTGTGGCTGAATTTAGGAGCTATAAAGACGACGGTGGTTCAGTCCTCGAAGGCGGCAGCTGAACTGTTCAAGAACAAGGACCTCTGTTTCTCGGACCGCACCATCACCGAAACCATGCGCGCTCAGGGGTACCATGAAAGCTCCTTGGCCCTGGCTCCATATGGCCCACACTGGCGCTCCTTGAGGCGTCTGATGACGATGGAGATGCTGGTTACGAAGCGGATCAACGAGACTGCCGGGGTACGTAGAAAATGTGTGGATGACATGTTGTCATGGATAGAAGAGGAGGCGCGTGGGGTGGGAGGAGAGGGGCGTGGAATTCAGGTGGCTCACTTCGTCTTTCTGGCGTCATTTAACATGCTGGGAAACCTGATGCTGTCATGTGACCTGCTGCATCCAGGATCCAAGGAGGGGTCGGAGTTCTTCGAGGTTATGGTCAGGGTTATGGAGTGGTCAGGCCATCCCAACTTTGCGGACTTTTTTCCATGGCTGAGATGGATGGACCCACAGGGCTTAAGGAAGAAGGCGGAGCGTGACCTTGGAATAGCCATGAAAATCGCTTCTGGATTTGTTCAAGAGCGGATAAAACGAGGGCCGGCGGCGGAGGACCATAAGAAGGACTTCCTGGATGTGTTGCTTGACTTCCAAGGAAGTGGAAAGAATGAGCCACCTCAAATTTCAGATAAGGACTTGAACATCATCATTCTGGAAATATTCATGGCAGGATCAGAAACCACTAGCAGCACGGTTGAATGGGCACTGACGGAGCTCTTACGCCATCCCGAATGCATGGCGAAGGTTAAAGCTGAGCTTGGTCGAGTTGTTGGAGCAAACGGTAAGTTAGAAGAGAATCACATTGATGATCTCCAATATTTACAGGCTGTCGTGAAGGAAACATTCAGGTTGCACCCTCCAATCCCATTTCTGGTTCCTCGGAAGGCAGTTCGAGACACCAATTTCATGGGATACCATATTCCCAAAAACACACAGCTTTTTGTGAATGTTTGGGCCATCGGAAGGGAAGCGGAGTTGTGGGAGGAGCCTTCGTCCTTCAAGCCTGAGAGGTTTTTAGACTTAAACCATATTGATTATAAGGGTCAACATTTCGAGCTGATCCCCTTTGGAGCCGGTCGAAGGATGTGTGCGGGAGTTCCATTAGCTCATCGGATGGTGCACCTTGTTCTGGGGTCCTTGGTTTACCATTTTGACTGGCAACTTGACAGCAGTATCACTCTTGAGACCATGGACATGAGAGAGAATTTGGCCATGGTGATGAGGAAGTTGGAACCACTCAAGGCTCTACCCAAAAAAGTTTCTCTCTGA 1557 0.5093 MEVTCFLEGIMADWASNILLWCIILVIPVLFLLLRRRRSGSVRLPPGPPGWPVFGNMFDLGAMPHETLAGLRHKYGDVVWLNLGAIKTTVVQSSKAAAELFKNKDLCFSDRTITETMRAQGYHESSLALAPYGPHWRSLRRLMTMEMLVTKRINETAGVRRKCVDDMLSWIEEEARGVGGEGRGIQVAHFVFLASFNMLGNLMLSCDLLHPGSKEGSEFFEVMVRVMEWSGHPNFADFFPWLRWMDPQGLRKKAERDLGIAMKIASGFVQERIKRGPAAEDHKKDFLDVLLDFQGSGKNEPPQISDKDLNIIILEIFMAGSETTSSTVEWALTELLRHPECMAKVKAELGRVVGANGKLEENHIDDLQYLQAVVKETFRLHPPIPFLVPRKAVRDTNFMGYHIPKNTQLFVNVWAIGREAELWEEPSSFKPERFLDLNHIDYKGQHFELIPFGAGRRMCAGVPLAHRMVHLVLGSLVYHFDWQLDSSITLETMDMRENLAMVMRKLEPLKALPKKVSL* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g1193 518 CDD CYP76-like 72 513 - -
Vvi8g1193 518 FunFam Cytochrome P450 76C4 36 512 - -
Vvi8g1193 518 Pfam Cytochrome P450 45 502 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1193 518 PRINTS E-class P450 group I signature 449 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1193 518 PRINTS E-class P450 group I signature 459 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1193 518 PRINTS E-class P450 group I signature 72 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1193 518 PRINTS E-class P450 group I signature 308 325 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1193 518 PRINTS E-class P450 group I signature 328 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1193 518 PRINTS E-class P450 group I signature 412 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1193 518 PRINTS E-class P450 group I signature 371 389 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1193 518 PRINTS P450 superfamily signature 450 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1193 518 PRINTS P450 superfamily signature 459 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1193 518 PRINTS P450 superfamily signature 372 383 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1193 518 PRINTS P450 superfamily signature 319 336 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1193 518 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 452 461 IPR017972 GO:0005506|GO:0016705
Vvi8g1193 518 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 21 515 - -
Vvi8g1193 518 Gene3D Cytochrome P450 38 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1193 518 SUPERFAMILY Cytochrome P450 38 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi8g1193 Vvi-Chr8 18077891 18079993 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi8g1193 22 513 Cytochrome P450 AT3G52970 43.798 1.71e-142 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g1193 K22983 - vvi:100251201 1033.48