Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g1192 ATGTCCTTCATGCTTTGCCGGAGAAAGTCTGGCTTCAACCGGCTACCTCCAAGACCAATAGGATGGCCAATTCTGAGCAACATGTTGGATCTCGGAACAATGCTGCACCAGACACTTGCGGGGTTAAGACACAAGTATGGGGACGTGGTGTGGCTCAGGCTCGGTGCCATAAAGACCATGGTTATTCTGTCCTCTAAGGCTGCTGGTGAGCTGTTCAAGAACCACGACCTCTCTTTTGCTGACCGCAGCATTGGGGAAACAATGCGAGTTCATGAGTACAACGAGGGGTCCTTGGCCCTAGTACCTTATGGCCCATACTGCAAGGGAAGAGCTCATTGA 339 0.5162 MSFMLCRRKSGFNRLPPRPIGWPILSNMLDLGTMLHQTLAGLRHKYGDVVWLRLGAIKTMVILSSKAAGELFKNHDLSFADRSIGETMRVHEYNEGSLALVPYGPYCKGRAH* 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g1192 112 Pfam Cytochrome P450 16 86 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1192 112 SUPERFAMILY Cytochrome P450 14 107 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1192 112 Gene3D Cytochrome P450 4 111 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1192 112 PANTHER CYTOCHROME P450 FAMILY 1 5 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi8g1192 Vvi-Chr8 18064268 18065728 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi8g1192 13 106 Cytochrome P450 AT3G52970 41.053 9.08e-18 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g1192 K22983 - jre:108984772 159.844