Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g1190 ATGGAGTTGTCCACCGCTTCCATTGTTTTCTGGAGCTGTTTCTTCTCAGCAGCTCTACTACTTTTCCTGAGATTGATCAAATTCACAAAAGGTTCAACCAAATCTACACCTCCAGGTCCCCAAGGATGGCCTATTTTTGGCAACATATTTGATCTGGGAACCCTGCCGCACCAGACCCTTTACAGGCTTCGACCTCAGCATGGACCTGTTCTTTGGTTACAGCTTGGGGCCATAAACACCATGGTCGTACAGTCTGCCAAGGCTGCGGCTGAACTTTTTAAGAATCATGACCTCTCTTTCTCCGACCGCAACGTTCCATTTACGTTGACCGCACACAACTACGACCAAGGTTCGATGGCTCTCGGCAAATATGGCCCATACTGGCGAATGATCCGGAAGGTATGCGCCAGTGAACTCCTAGTCAACAAGCGGATCAATGAAATGGGTTCCCTTCGGAGGAAGTGTGTCGACGACATGATCCGGTGGATTGAGGAGGATGCGGCCAAGTCAGGTGCGGAGGGAAGAGCAGGGGAAGTGGAACTGCCCCACTTCCTATTTTGCATGGCATTCAACCTTATCGGCAACATCACGCTGTCACGCGATGTCGTGGACATCAAGTCCAAGGACGGGCACGAGTTCTTTCAAGCCATGAACGGGGTCGTGGAGTGGGCAGGGAGACCCAACATCGCTGACTTCTTCCCCTTGCTGAAACGCTTGGACCCGCTGGGGATGATGAGGAACATGGTCCGAGACATGGGACAAGCCCTCAATTTAATTGCGAGGTTTGTGAAGGAGAGAGATGAGGAGCGGCAGTCTGGGATGGTGAGGGAGAAGAGAGATTTCTTGGATGTGTTGTTAGAGTGCAGAGATGATGAGAAAGAAGGTCCCCATGAGATGTCAGACAACAAAGTGAAAATAATCGTACTGGAAATGTTCTTTGCCGGGTCAGACACTACAAGCAGTACGCTCGAATGGGCTATGACAGAGCTACTCCGCAGACCTGAGTCAATGAGAAAGGCCCAAGAAGAGCTTGATCGAGTTGTTGGACCACATGGGAAGGTTGAAGAGAGCGACATTGATCAGCTGCTATATTTGCAAGCCGTGGTGAAGGAAACTCTACGACTGCATCCCCCAATTCCTTTACTGCTTCCACGAAATGCATTACAAGACACAAACTTCATGGGCTATTTCGTACCCAAAAACACACAAGTCTTTGTCAATGCATGGGCGATTGGAAGGGACCCGGATGCTTGGAAAGAGCCTCTCTCTTTCAAGCCTGATAGATTTTTGGGCTCAAATCTAGACTATAAAGGGCAGAATTTTGAGTTCATTCCATTTGGATCTGGACGACGGATTTGCATCGGTATATCTTTAGCTAACAAATTGCTGCCTCTCGCTCTGGCCTCTCTGCTTCACTGTTTTGACTGGGAGCTTGGCGGCGGTGTCACTCCAGAGACCATAGACATGAATGAGAGAGTAGGAATGGCGGTGAGAAAATTAATACCGCTGAAACCAATACCCAAAAGGAGGACTGGACTAAGGAAGAACATGGAGCGTGACCTAGGAAAAGCTATGGAAATGGCTTCTGGATTCGTCAATGAGCGCATGAAAAAACAGAGAACGGAAGGGACCAAGAGAAAGGACTTTCTGGATGTGCTGCTGGAGTTTGAAGGAAATGGTAAGGACGAGCCCGCTAAAATCTCAGACCGCGACGTCATTATATTTATACTGGAAATATTTTTGGCGGGATCAGAAACCAGTAGCAGCATTGTTGAATGGGCAATGACGGAGCTACTACGCAACCCCAAATCAATGTCGGAGGTGAAAGATGAGCTTGCTCGAGTCGTCGGAGCAGATAGGAATGTTGAAGAGAGCGACATTGATGAGCTCCAATATTTACAGGCCGTGGTGAAAGAAACGTTACGATTACATCCTCCAATCCCATTCCTAATTCTACGGAGTGCAATTCAAGATACCAGCTTCATGGGGTACCATATACCAAAAGATACTCAAGTTCTTGTGAATGCTAGGGCCATCGGAAGAGACCCGGGTTCCTGGGAAGACCCATCATCTTTCAAGCCTGAGAGGTTTCTAGATTCCAAAAAAATAGAATATAAGGGACAAAATTTTGAGCTGATCCCATTTGGTGCAGGGCGAAGGATTTGTGCAGGGATTCCATTAGCTCATCGAGTGTTGCACCTTGTTCTAGGGACGTTACTTCACCATTTTGACTGGCAACTCAAGGGCAATGTCACCCCCGAGACCATGGACATGAAAGAGAAGTGGGGGTTGGTAATGCGCAAGTCACAGCCATTAAAAGCAGTACCTAAAAAGCTTACATAG 2343 0.4802 MELSTASIVFWSCFFSAALLLFLRLIKFTKGSTKSTPPGPQGWPIFGNIFDLGTLPHQTLYRLRPQHGPVLWLQLGAINTMVVQSAKAAAELFKNHDLSFSDRNVPFTLTAHNYDQGSMALGKYGPYWRMIRKVCASELLVNKRINEMGSLRRKCVDDMIRWIEEDAAKSGAEGRAGEVELPHFLFCMAFNLIGNITLSRDVVDIKSKDGHEFFQAMNGVVEWAGRPNIADFFPLLKRLDPLGMMRNMVRDMGQALNLIARFVKERDEERQSGMVREKRDFLDVLLECRDDEKEGPHEMSDNKVKIIVLEMFFAGSDTTSSTLEWAMTELLRRPESMRKAQEELDRVVGPHGKVEESDIDQLLYLQAVVKETLRLHPPIPLLLPRNALQDTNFMGYFVPKNTQVFVNAWAIGRDPDAWKEPLSFKPDRFLGSNLDYKGQNFEFIPFGSGRRICIGISLANKLLPLALASLLHCFDWELGGGVTPETIDMNERVGMAVRKLIPLKPIPKRRTGLRKNMERDLGKAMEMASGFVNERMKKQRTEGTKRKDFLDVLLEFEGNGKDEPAKISDRDVIIFILEIFLAGSETSSSIVEWAMTELLRNPKSMSEVKDELARVVGADRNVEESDIDELQYLQAVVKETLRLHPPIPFLILRSAIQDTSFMGYHIPKDTQVLVNARAIGRDPGSWEDPSSFKPERFLDSKKIEYKGQNFELIPFGAGRRICAGIPLAHRVLHLVLGTLLHHFDWQLKGNVTPETMDMKEKWGLVMRKSQPLKAVPKKLT* 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g1190 780 CDD CYP76-like 67 507 - -
Vvi8g1190 780 PRINTS E-class P450 group I signature 366 384 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1190 780 PRINTS E-class P450 group I signature 443 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1190 780 PRINTS E-class P450 group I signature 303 320 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1190 780 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1190 780 PRINTS E-class P450 group I signature 323 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1190 780 PRINTS E-class P450 group I signature 407 431 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1190 780 PRINTS E-class P450 group I signature 453 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1190 780 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 715 724 IPR017972 GO:0005506|GO:0016705
Vvi8g1190 780 SUPERFAMILY Cytochrome P450 37 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1190 780 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 446 455 IPR017972 GO:0005506|GO:0016705
Vvi8g1190 780 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 17 509 - -
Vvi8g1190 780 Gene3D Cytochrome P450 22 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1190 780 Gene3D Cytochrome P450 499 778 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1190 780 Pfam Cytochrome P450 37 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1190 780 Pfam Cytochrome P450 513 769 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1190 780 PRINTS P450 superfamily signature 367 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1190 780 PRINTS P450 superfamily signature 453 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1190 780 PRINTS P450 superfamily signature 444 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1190 780 PRINTS P450 superfamily signature 314 331 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1190 780 FunFam Cytochrome P450 76C4 28 506 - -
Vvi8g1190 780 FunFam Geraniol 8-hydroxylase 521 775 - -
Vvi8g1190 780 SUPERFAMILY Cytochrome P450 499 777 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi8g1190 Vvi-Chr8 18050463 18058400 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi8g1190 512 776 Cytochrome P450 AT3G52970 45.588 1.77e-67 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g1190 - K20618 vvi:100267172 1006.13