Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g1189 ATGGTCGTACAGTCTGCCAAGGCTGCGGCTGAACTTTTTAAGAATCATGACCTCCCTTTCTCCGACCGCAACGTTCCATTTACGTTGACCGCACACAACTACGACCAAGGTTCGATGGCTCTCGGCAAATATGGCCCATACTGGCGAATGATCCGGAAGGTATGCGCCAGTGAACTCCTAGTCAACAAGCGGATCAATGAAATGGGTTCCCTTCGGAGGAAGTGTGTCGACGACATGATCCGGTGGATTGAGGAGGATGCGGCCAAGTCAGGTGCGGAGGGAAGAGCAGGGGAAGTGGAACTGCCCCACTTCCTATTTTGCATGGCATTCAACCTTATCGGCAACATCACGCTGTCACGCGATGTCGTGGACATCAAGTCCAAGGACGGGCACGAGTTCTTTCAAGCCATGAACGGGGTCATGGAGTGGGCAGGGAGACCCAACATCGCTGACTTCTTCCCCTTGCTGAAACGCTTGGACCCGCTGGGGATGATGAGGAACATGGTCCGAGACATGGGACAAGCCCTCAATTTAATTGCGAGGTTTGTGAACGAGAGAGATGAGGAGCGGCAGTCTGGGATGGTGAGGGAGAAGAGGGATTTCTTGGATGTGTTGTTAGAGTGCAGAGATGATGAGAAAGAAGGTCCCCATGAGATGTCAGACAACAAAGTGAAAATAATCGTACTGGAAATGTTCTTTGCCGGGTCAGAAACTACAAGCAGTACGCTCGAATGGGCTATGACAGAGCTACTCCGCAGACCTGAGTCAATGAGAAAGGCCCAAGAAGAGCTTGATCGAGTTGTTGGACCACATGGGAAGGTTGAAGAGAGCGACATTGATCAGCTGCTATATTTGCAAGCCGTGGTGAAGGAAACTCTACGACTGCATCCCCCAATTCCTTTACTGCTTCCACGAAATGCATTACAAGACACAAACTTCATGGGCTATTTCGTACCCAAAAACACACAAGTCTTTGTCAATGCATGGGCGATTGGAAGGGACCCGGATGCTTGGAAAGAGCCTCTCTCTTTCAAGCCTGATAGATTTTTGGGCTCAAATCTAGACTATAAAGGGCAGAATTTTGAGTTCATTCCATTTGGATCTGGACGACGGATTTGCATCGGTATATCTTTAGCGAACAAATTGCTGCCTCTCGCTCTGGCCTCTCTGCTTCACTGTTTTGACTGGGAGCTTGGCGGCGGTGTCACTCCAGAGACCATGGACATGAATGAGAGAGTAGGAATTACGGACGTGATATGA 1260 0.4984 MVVQSAKAAAELFKNHDLPFSDRNVPFTLTAHNYDQGSMALGKYGPYWRMIRKVCASELLVNKRINEMGSLRRKCVDDMIRWIEEDAAKSGAEGRAGEVELPHFLFCMAFNLIGNITLSRDVVDIKSKDGHEFFQAMNGVMEWAGRPNIADFFPLLKRLDPLGMMRNMVRDMGQALNLIARFVNERDEERQSGMVREKRDFLDVLLECRDDEKEGPHEMSDNKVKIIVLEMFFAGSETTSSTLEWAMTELLRRPESMRKAQEELDRVVGPHGKVEESDIDQLLYLQAVVKETLRLHPPIPLLLPRNALQDTNFMGYFVPKNTQVFVNAWAIGRDPDAWKEPLSFKPDRFLGSNLDYKGQNFEFIPFGSGRRICIGISLANKLLPLALASLLHCFDWELGGGVTPETMDMNERVGITDVI* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g1189 419 PRINTS E-class P450 group I signature 243 269 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1189 419 PRINTS E-class P450 group I signature 363 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1189 419 PRINTS E-class P450 group I signature 223 240 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1189 419 PRINTS E-class P450 group I signature 286 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1189 419 PRINTS E-class P450 group I signature 327 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1189 419 PRINTS E-class P450 group I signature 373 396 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1189 419 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 366 375 IPR017972 GO:0005506|GO:0016705
Vvi8g1189 419 Pfam Cytochrome P450 1 411 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1189 419 Gene3D Cytochrome P450 1 417 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1189 419 PRINTS P450 superfamily signature 373 384 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1189 419 PRINTS P450 superfamily signature 287 298 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1189 419 PRINTS P450 superfamily signature 364 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1189 419 PRINTS P450 superfamily signature 234 251 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1189 419 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 416 - -
Vvi8g1189 419 FunFam Geraniol 8-hydroxylase 172 418 - -
Vvi8g1189 419 SUPERFAMILY Cytochrome P450 2 414 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi8g1189 Vvi-Chr8 18045170 18047497 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi8g1189 1 416 Cytochrome P450 AT3G52970 43.807 2.08e-118 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g1189 - - vvi:100244368 828.55