Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g1187 ATGAGTTCGCTTCTTTGGTGGAGTGCTTTCTTCTCTGCGGCGTTACTAGTCCTGCTGAGACGGATAAAGCCCAGAAAAGGTTCAACCAAATTGCGACCTCCAGGGCCCCAAGGGTGGCCAATCCTTGGCAACATATTTGATCTGGGAACCATGCCTCACCAGACCCTGTACAGGCTTCGATCTCAGTATGGGCCCGTTCTCTGGTTACAGCTTGGGGCCATAAACACCGTGGTGATACAATCAGCCAAGGTGGCAGCTGAACTCTTCAAGAATCATGACCTTCCTTTCTCCGACCGCAAGGTCCCATGTGCATTAACTGCTTTGAACTACAATCAAGGATCAATGGCTATGAGCAACTACGGCACCTACTGGAGAACTCTCCGGAAGGTGTGCTCCAGTGAACTCCTAGTCATCAAGCGGATCAATGAAATGGCTCCCCTCCGACACAAGTGTGTTGACAGGATGATCCAGTGGATTGAGGATGATGCTACAATGGCGCGTGTACAGGGAGGATCAGGTGAGGTGGAAGTTTCCCACCTTGTATTTTGTGTGGCATTCAACCTCATCGCCAACCTCATGCTGTCCCGTGATTTCTTCGACATGAAGCCCAAGGAAGGGAACGAGTTCTATGATGCCATGAACAAAATCATGGAGTTGGCCGGGAAGCCTAACACGGCGGACTTCTTCCCATTTTTGAAATGGCTGGACCCACAGGGGATCAAGAGGAACATGGTGAGAGAATTGGGACGAGCCATGGATATCATTGCGGGATTTGTGAAGGAGAGGGTTGAGGAGCGACAGACAGGTATAGAGAAGGAGAAGAGGGATTTCCTGGATGTGTTGTTGGAGTACAGACGTGATGGGAAAGAAGGATCTGAGAAATTATCAGAGAGGAATATGAATATAATCATACTGGAAATGTTCTTCGGAGGGACAGAAACTACAAGCAGTACAATCGAATGGGCAATGACAGAGCTACTCCGCAAACCCAAGTCAATGAGAAAGGTTAAAGAGGAGCTTGATCGAGTTGTTGGACCAGATAGGAAGGTTGAAGAGAGCGACATCGATGAACTGCTATATTTGCAAGCTGTGGTGAAGGAAACTCTACGCTTGCATCCCGCGCTTCCTTTACTGATTCCACGAAATGCATTGCAAGACACTAACTTCATGGGCTATTTCATACCCCAAAATACCCAAGTTTTTGTAAATGCCTGGTCGATTGGAAGGGACCCGGAAGCCTGGCACAAGCCCCTCTCTTTCAAGCCGCGGAGGTTTTTAGGCTCTGATATAGACTACAAGGGGCAGAATTTTGAGTTGATTCCATTTGGATCAGGGAGACGGATGTGCATAGGTATGCCATTCGCTCACAAAGTAGTGCCCTTTGTTCTGGCCTCACTGCTTCACTGTTTTGATTGGGAGCTTGGCAGTAATTTAACACCAGAAACAATTGACATGAATGAGAGGGTGGGCCTAACACTGAGAAAGCTAGTACCTCTGAAAGCAATACCCAGAAAGCGTATTGTTAGGGATCGATGA 1536 0.4805 MSSLLWWSAFFSAALLVLLRRIKPRKGSTKLRPPGPQGWPILGNIFDLGTMPHQTLYRLRSQYGPVLWLQLGAINTVVIQSAKVAAELFKNHDLPFSDRKVPCALTALNYNQGSMAMSNYGTYWRTLRKVCSSELLVIKRINEMAPLRHKCVDRMIQWIEDDATMARVQGGSGEVEVSHLVFCVAFNLIANLMLSRDFFDMKPKEGNEFYDAMNKIMELAGKPNTADFFPFLKWLDPQGIKRNMVRELGRAMDIIAGFVKERVEERQTGIEKEKRDFLDVLLEYRRDGKEGSEKLSERNMNIIILEMFFGGTETTSSTIEWAMTELLRKPKSMRKVKEELDRVVGPDRKVEESDIDELLYLQAVVKETLRLHPALPLLIPRNALQDTNFMGYFIPQNTQVFVNAWSIGRDPEAWHKPLSFKPRRFLGSDIDYKGQNFELIPFGSGRRMCIGMPFAHKVVPFVLASLLHCFDWELGSNLTPETIDMNERVGLTLRKLVPLKAIPRKRIVRDR* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g1187 511 Gene3D Cytochrome P450 23 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1187 511 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 15 505 - -
Vvi8g1187 511 CDD CYP76-like 63 503 - -
Vvi8g1187 511 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 442 451 IPR017972 GO:0005506|GO:0016705
Vvi8g1187 511 Pfam Cytochrome P450 33 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1187 511 SUPERFAMILY Cytochrome P450 33 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1187 511 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1187 511 PRINTS E-class P450 group I signature 319 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1187 511 PRINTS E-class P450 group I signature 403 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1187 511 PRINTS E-class P450 group I signature 299 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1187 511 PRINTS E-class P450 group I signature 362 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1187 511 PRINTS E-class P450 group I signature 449 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1187 511 PRINTS E-class P450 group I signature 439 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1187 511 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1187 511 PRINTS P450 superfamily signature 440 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1187 511 PRINTS P450 superfamily signature 310 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1187 511 PRINTS P450 superfamily signature 449 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vvi8g1187 511 FunFam Cytochrome P450 76C4 24 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi8g1187 Vvi-Chr8 18038159 18039776 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi8g1187 10 503 Cytochrome P450 AT3G52970 43.640 3.67e-143 420
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g1187 - K20618 vvi:100249522 1025.39