Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g1161 ATGGCACATAAAAATCTGCACGAGCTGTTGCAGGAAGATCAGGAGCCCTTCCTTCTGAAGAACTACATTGCAGACAGACGTTGCCAACTCAAGCGACCCCTACCCAAGACCCGTATACAACTCAAGAAACGAAAACCCATCTCAGAAACCTCGAGCTTTTCCGGAAATTTCTGTAAAAATGCATGCCTTTTCTCCTTCCACGACTCGCCGGACGTCAAAAAGTCCCCACTTTGGTCCCCGGCCAAAAGCCCCCGCAAAAACTCAAATGCCATTTTCCTCCATATCCCCGCCAGAACAGCAGCTATGCTTCTTGAAGCTGCGCTGAGGATTCAAAAACAGTCTTCTCCAAAACCCAAAGCCCAGAACAAGAACGTGGGCTTTGGTATATTCGGGTCTATAATGAAGAGACTAACTCAGCGTAACCGGAATCGAAAGCGCGAAATCGAGGGTGATGGTCTTAGGGTTTCTGTGAAGGATATTCTGAGGTGGGATTCGTCGGTTGGGCGTAAAAAATTCACGGAAGATTTCAAGAATGTTTCAGAGGAAATGGTGGGAGTGGAGGAGAAAAGTGCTTCTGAAATGGGGTTTTCATGCTCTTGTAACGGAAGACTTAGTAGTGTTTGGTCTGAGAGCAATGAAGAGAAGTCTTTGGACATGGAGACCTCTAGCAGTAGCCAGTCCGAGGTCTCTGCAGAGATTATTGACTTCGTATCTAAAGAGAGACAAAATGGTGATTTTGCTTCTTGTGAGAAGGATTTTTGTACAAGCCCCTTTCGCTTTGTTCTTCAACGGAGCCCGTCGTCAGGACGCCATACGCCAAACTTCTCCTCGCCGGCAACATCCCCAGGTCGCCACAGGTCTCAGGACAAAGAGAACAACTATGAAGGAGAGAGCTTAATAGAAGAAGAGGAAGAAGAGAAGGAACAGTTCAGTCCTGTATCCATATTGGACCCTCCCTTCGAAGACGACGATGATGGACACGAAGGAGATGATGATGGTGATGATGATGGCAGTTTTGATCTTGAATGCAGCTACGCCATTGTACAGAGAGCAAAGCAGCAGCTACTACACAAGCTTCGTAGATTTGAGAAATTGGCTGAGTTGGATCCTATTGAGCTTGAGAAGAGGATGCTAGAAGGACTAGATGATGATAACAATGATGCGGCCCAGTGGGATGCAGAATCAGAGGATTGTGTAGATGATGATGAGTCAATAGCATCAGATAGGGAAAAGAAGGTAGATGATTTTGTAAGAGAAGTCCTTAACAAATCAGGGTTCCACCATTTTCAGGGAATTCCCCAGGACATGAAGAGACTGGTGTCTGATCTCATTGCCCAGGAAGAGAGAGAACAACAGTGCTCAAGGAGTAGGGAGGTGGTGGTGGAAAGGGTTTGCAAGAGGTTGGAGTCTTGGACAGAGGTGGAATCCAACACCATTGACATGATGGTGGAATTGGACTTCAGAAGAGAGCTTAGTGGGTGGAGTAAAAACCAGGAGCAGGTTGACGAGGCGGCAATAGAGATTGAGCTAGCCATCTTTGGGCTACTGGTGGAGGAGGTGTCAGAGGAACTCGTTTGTTTAAAAGGAATTTAA 1593 0.467 MAHKNLHELLQEDQEPFLLKNYIADRRCQLKRPLPKTRIQLKKRKPISETSSFSGNFCKNACLFSFHDSPDVKKSPLWSPAKSPRKNSNAIFLHIPARTAAMLLEAALRIQKQSSPKPKAQNKNVGFGIFGSIMKRLTQRNRNRKREIEGDGLRVSVKDILRWDSSVGRKKFTEDFKNVSEEMVGVEEKSASEMGFSCSCNGRLSSVWSESNEEKSLDMETSSSSQSEVSAEIIDFVSKERQNGDFASCEKDFCTSPFRFVLQRSPSSGRHTPNFSSPATSPGRHRSQDKENNYEGESLIEEEEEEKEQFSPVSILDPPFEDDDDGHEGDDDGDDDGSFDLECSYAIVQRAKQQLLHKLRRFEKLAELDPIELEKRMLEGLDDDNNDAAQWDAESEDCVDDDESIASDREKKVDDFVREVLNKSGFHHFQGIPQDMKRLVSDLIAQEEREQQCSRSREVVVERVCKRLESWTEVESNTIDMMVELDFRRELSGWSKNQEQVDEAAIEIELAIFGLLVEEVSEELVCLKGI* 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g1161 530 Pfam Domain of unknown function (DUF4378) 415 519 IPR025486 -
Vvi8g1161 530 PANTHER OS04G0572500 PROTEIN 1 525 - -
Vvi8g1161 530 MobiDBLite consensus disorder prediction 264 340 - -
Vvi8g1161 530 MobiDBLite consensus disorder prediction 264 283 - -
Vvi8g1161 530 MobiDBLite consensus disorder prediction 318 339 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi8g1161 2 321 TRM (TON1 Recruiting Motif) Superfamily AT5G03670 49.704 2.75e-73 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g1161 - - vvi:100244201 962.985