Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g1150 ATGGAGGGAAAGATCATCTTCTACCTTTGTTTTTTGATCTGTTTTCTACTCACAGGGGTGAAGGGTTCATCACATCACCACCATCACTCTCACCGTCACCTCTTTGGTTTTCGTCCATTAAAGCTCTTCGTTTTCGGGGACTCGTATGCTGATACAGGGAACATTGGCAAGACGGCAGCCAATTCTTGGAAAGTTCCCTACGGAATCACCTTTCCCGGCAAGCCGGCCGGCCGTTTCTCCGATGGTCGTGTCTTGACTGACTACCTAGCTAGATTCGTCGGAATCAAGTCGCCAATACCATACAGATGGAGGAATCTCGGCGCAAAACACTTGCGATATGGGATGAACTTTGCTTTTGGAGGGACGGGTGTGTTTGATACGTTGGTCGCATTGCCAAACATGACGACCCAGATCGATTTTCTCCAAGAGCTCCTCAGCAACAAGGTCTACACTTGGCCGGATCTTCAGTCGTCAGTAGCCCTCGTCAGCATCGCCGGCAACGACTACGGTGCTTACTTGGCCAGAGGTGGCTCTTCTCAGACATTGCAGTCTTTCATTCTTCTGGTGGTGGATCAACTAGTGGTGAACTTGAAGCGCCTTCATGGCATGGGAATGAAAAAGGTTGCAGTGACATCTCTTGAGCCACTGGGGTGTCTCCCACAGACCACAGTGTCATCTTCTTTCCAAGAATGCAATGGAACCCAGAACACGGCTGTCACCTTCCACAACCTCTTGTTGTCCCAAGCTGTGACCAAGTTGAACAATGAAACCAAGGACTCCCCTTTTGTCATTCTCGACCTTTACGCCTCTTTCATGTCCGTCTTCGAAAACAAAGCTGATCATTTAGGGAGTTCCAAGTTCGAGAATCCATTGAAGCCATGTTGCATGGGTATAAGCAGTGAATACTCGTGCGGGAGTGTGGACGAGAGTGGGGCGAAGAAGTATACAATATGCGACGACCCTGAATCTGCGTTCTTTTGGGACACCGTCCACCCTACGCAACAGGGATGGAATGCTGTTTATTCTGCTTTACAAGGCACCCTTCAACAACTTCACAGTCTTTACTAG 1068 0.4906 MEGKIIFYLCFLICFLLTGVKGSSHHHHHSHRHLFGFRPLKLFVFGDSYADTGNIGKTAANSWKVPYGITFPGKPAGRFSDGRVLTDYLARFVGIKSPIPYRWRNLGAKHLRYGMNFAFGGTGVFDTLVALPNMTTQIDFLQELLSNKVYTWPDLQSSVALVSIAGNDYGAYLARGGSSQTLQSFILLVVDQLVVNLKRLHGMGMKKVAVTSLEPLGCLPQTTVSSSFQECNGTQNTAVTFHNLLLSQAVTKLNNETKDSPFVILDLYASFMSVFENKADHLGSSKFENPLKPCCMGISSEYSCGSVDESGAKKYTICDDPESAFFWDTVHPTQQGWNAVYSALQGTLQQLHSLY* 356
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g1150 355 SUPERFAMILY SGNH hydrolase 41 350 - -
Vvi8g1150 355 Pfam GDSL-like Lipase/Acylhydrolase 42 342 IPR001087 GO:0016788
Vvi8g1150 355 Gene3D SGNH hydrolase 40 352 IPR036514 -
Vvi8g1150 355 PANTHER OSJNBB0059K02.9 PROTEIN 15 351 - -
Vvi8g1150 355 CDD SGNH_plant_lipase_like 42 344 IPR035669 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vvi8g1150 Vvi-Chr8 17614691 17618448 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi8g1150 42 340 Pollen Coat Proteome AT1G75930 28.743 1.03e-27 109