Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g1147 ATGGATGAGGAGAGACACTCCGGTTCGAATTATTCGTCTTCTTTATCGTCGTCGCGACCGCGGTCTTCGGCGGCGGCATCTAGGTTTAACATTAAGGGAGCGGATCGGCTGGTGAAAATTGAGCTGGAAGCGGCGGAAGTACTGGCAGATTTGGCGCAGTCCTTGATGCGTGAGAGTGAGAGTAATGGGGCTGAATCTGGAGGAAAATGGGGGAGTAAAGGGAAACGCGGAAGGAAGCGAGTCAAGAGCGAGTCTCCACCGAGTGACGAGTTCAAGAACCCGGATAACCTGTTTCCTGGCTCTTCGGATCTCACCGAGCAGGATAAACAATCAGTGGTTCAACAAGAGTGTAGAAAGATAGACAGAAATGTATTTCTAACAAAGACTGAGACAGATGATGAATTTGCTAAACCAAGTCCTATGTGCACCACAACTTATGCACCCCATCATAGTGGCAAGTTGAGACAAAATTTGACTGAGGCTGAAAAGGAAGCACGGAGATTGCGCAGGGTATTAGCAAACAGAGAATCAGCTAGGCAGACAATTCGCCGTAGGCAGGCTTTGTGTGGGGAATTGAGCAGAAAAGCTGCTGATCTATCATTGGAGAATGAAACTTTGAAAAGGGAAAAGGAGCTAGCTATGAAAGAGTTTCAGTCTTTGGAGAACAAAAACAAGCACTTAAAAGCACAGGTGGCTAAGATAATAAAGCCTGAGGAAGAGAAAACTCCAGAGTCTATCTCAAGCCACGAAATGACATCTATTCCTCCATCTTCAAATTGTCCATTGCTTTTATATAACCAACCTTCATTTACGCCATTTCTCTGGTCTTCACCTGAACGTAGATTCCAAAATGCCTTTGCATCCCATGCTGTACCTGATGAAAGAGAAAATCCCAACATTGATGCCTATAGAACTCCTTTATATATCCTGCCTTGCCCTTGGTTCTTTCCACTTCCCAACCATGGAAATGGACTCCACCTTCCGCCCTCTCTCAACTTGAAGGATAAACAAGATGCGGTGAATAGTCAATGCAGTGCTAGTTCATTGATAAAAAATAAATCAGATGCTCATCATATATCATCTCACTCTAATGCAATGATCCTCAGTCCTTCACCACTGATGTCCTTAAAATCTGCCATTACTTTCAAACACGAGGGTGAGCTCCAATCAAGTTACGTAGACAATGGGGAAGGTGGTCATATTGTAAGTGTTTTTTCAGAAAAGAATCAAGAACCAGTCATTTGTTCAAGTAAGAGACTGGTGGATGCAGTTGCTGCAGCAGAGGCTAGGAAGAGGAGGAAAGAGCTCACAAAGCTAAAAAACCTTCATGGACGTGTTCGGATGCACTGTTGA 1353 0.4442 MDEERHSGSNYSSSLSSSRPRSSAAASRFNIKGADRLVKIELEAAEVLADLAQSLMRESESNGAESGGKWGSKGKRGRKRVKSESPPSDEFKNPDNLFPGSSDLTEQDKQSVVQQECRKIDRNVFLTKTETDDEFAKPSPMCTTTYAPHHSGKLRQNLTEAEKEARRLRRVLANRESARQTIRRRQALCGELSRKAADLSLENETLKREKELAMKEFQSLENKNKHLKAQVAKIIKPEEEKTPESISSHEMTSIPPSSNCPLLLYNQPSFTPFLWSSPERRFQNAFASHAVPDERENPNIDAYRTPLYILPCPWFFPLPNHGNGLHLPPSLNLKDKQDAVNSQCSASSLIKNKSDAHHISSHSNAMILSPSPLMSLKSAITFKHEGELQSSYVDNGEGGHIVSVFSEKNQEPVICSSKRLVDAVAAAEARKRRKELTKLKNLHGRVRMHC* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g1147 450 MobiDBLite consensus disorder prediction 8 25 - -
Vvi8g1147 450 Pfam bZIP transcription factor 162 225 IPR004827 GO:0003700|GO:0006355
Vvi8g1147 450 CDD bZIP_plant_GBF1 167 218 IPR045314 GO:0003700|GO:0006355
Vvi8g1147 450 MobiDBLite consensus disorder prediction 57 112 - -
Vvi8g1147 450 Coils Coil 189 230 - -
Vvi8g1147 450 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 164 227 IPR004827 GO:0003700|GO:0006355
Vvi8g1147 450 MobiDBLite consensus disorder prediction 1 30 - -
Vvi8g1147 450 Coils Coil 151 178 - -
Vvi8g1147 450 PANTHER G-BOX-BINDING FACTOR 3-RELATED 52 259 IPR044827 GO:0003700|GO:0006355|GO:0043565
Vvi8g1147 450 SMART brlzneu 162 226 IPR004827 GO:0003700|GO:0006355
Vvi8g1147 450 SUPERFAMILY Leucine zipper domain 166 221 IPR046347 GO:0003700|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi8g1147 65 445 bZIP Transcription Factor Family AT1G19490 38.568 1.33e-61 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vvi8g1147 bZIP_1 7.9e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g1147 - - vvi:100257875 804.283