Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g1095 ATGCTGGGGAAGAAGATGGGGTCCGTGAAGAAACTAGTGAAGAAGGTGAAGGTTATAGGAGGAGGCGATCGGGAGCCGTCGCACCATGAATGTTTGCTGAGGGACTATGAAGAAGGATCTCCCTCAGGCACCACCCCGACTGGGTCTTTTGCGGTCTACGTGGGCGAAGAGAGGCAGAGATTCGTGGTGCCCACCAGCTTCCTTTCCCACCCTCTCTTCAAAATGCTGCTGGAGAAGGCCTACAACGAGTTCGGATTCGATCAGAGGAATGGGCTGGTGGTCCCCTGCAGTGTGTCGACTTTCCAAGAGGTCGTGAATGCTGTGGAATGCTGCAATGGCAAGTTTGATTTTGGGAATCTGGTCGAGGAGTTTGTTTAG 378 0.5317 MLGKKMGSVKKLVKKVKVIGGGDREPSHHECLLRDYEEGSPSGTTPTGSFAVYVGEERQRFVVPTSFLSHPLFKMLLEKAYNEFGFDQRNGLVVPCSVSTFQEVVNAVECCNGKFDFGNLVEEFV* 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g1095 125 Pfam Auxin responsive protein 30 107 IPR003676 GO:0009733
Vvi8g1095 125 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 29 104 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi8g1095 Vvi-Chr8 17142119 17142496 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi8g1095 41 109 Calmodulin-binding Proteins AT5G20810 55.072 1.90e-22 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g1095 K14488 - vvi:100252898 235.343