Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g1075 ATGGTCAATGACCGAAATGGAGGAACAGAGCAGTCGTGGAGCTTAAACAACACATCAATGGCAGCCAGGAGTGTGCATGTAGTGGATAACCTAGATGCAGTGGTTTCAATGGCAGACATGAGCGTTCGGAACAGCACAGAAAGAAGGAAAATGAGTTATTTCTTGTGTGGAATGGGTAATCCCATTGATGACCGCTGGCGATGTGACCACGATTGGCAAGACTACTCTTTCTACCGACTTCAAGATGGTTTTTCTCATCCAGGTACTGTGACATAA 276 0.4565 MVNDRNGGTEQSWSLNNTSMAARSVHVVDNLDAVVSMADMSVRNSTERRKMSYFLCGMGNPIDDRWRCDHDWQDYSFYRLQDGFSHPGTVT* 92
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi8g1075 Vvi-Chr8 17006815 17007090 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi8g1075 26 73 Polysaccharide Lyase AT5G48900 60.417 1.86e-16 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g1075 K01728 - vvi:100232902 119.783