Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g1018 ATGGCTGACGTTGAGAAACAAACATTGAATAAAGGCTACTATGGCCCCTCAATTCCTCCAAAATCACGATCCTACCACAGCCACGGCCGAGGCAGCGGATGCGGCTGTTGCTGCTGCCTCCTAGGCTTTTTGCTCAAACTCATTGTCACCGTCGTTATCATCGTAGGGATTGCAGTCCTCCTCTTCTGGCTCATAGTCCGTCCCAACAAGGTTAAGTTCCATGTGGTTGATGCCTCCCTCACCGAGTTCAACCTTACCAGCGACAACATCCTTCAGTATAACCTTACCGTCAATATGACCGTCCGCAACCCCAACAAGCGTATTGGTATATACTTTGATCGCATCGAAGCCAAGGCGTACTATGAGGACGCCTTGTTCGATTCTGTTGAGTTGGAACGATATTACCAGGGCCACAAGTCAACTCATACCCTGAATCCAGAGTTTACTGGGGAGAACTCTGTATCGCTTGGAGCATCCGAGCTTTCGAATTTCAATTCGGAGAAGGCTTCAGGAACTTACAGTATTGATGTGAAGCTGCGTCTTCGGATCAGGTTCAAGTTGGGAATATTGAAGATTGGTACGTTCAAGCCCAAGGTTACTTTGTGCGACGTTAATTTCTGA 621 0.4783 MADVEKQTLNKGYYGPSIPPKSRSYHSHGRGSGCGCCCCLLGFLLKLIVTVVIIVGIAVLLFWLIVRPNKVKFHVVDASLTEFNLTSDNILQYNLTVNMTVRNPNKRIGIYFDRIEAKAYYEDALFDSVELERYYQGHKSTHTLNPEFTGENSVSLGASELSNFNSEKASGTYSIDVKLRLRIRFKLGILKIGTFKPKVTLCDVNF* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g1018 206 PANTHER OS05G0367900 PROTEIN 34 193 IPR044839 GO:0098542
Vvi8g1018 206 Pfam Late embryogenesis abundant protein 99 195 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi8g1018 Vvi-Chr8 16430969 16431649 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi8g1018 65 199 SNARE and Associated Proteins AT1G32270 41.606 1.16e-26 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g1018 - - vvi:100247789 345.51