Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g1016 ATGGGTGTTCCTCAGGCCATGCAAACCCTAAGCGAGAGAGCAGCATTCACGAGGGAGTCTCTGCAAAAGAGCCAGACCATCACGGATAGTATGGTCGCCATTCTCGGCTCCTTCGACCACCGCCTCTCCGCTCTCGAAACCGCCATGCGTCCCACTCAGATAAGGACGCATTCGATTAGGAAGGCCCATGAGAATATAGATAAGACACTGAAGGCGGCTGAATTGATACTGGCCCAATTTGATCTCACCCGCAAGGCGGAGGCTAAAATACTGAGAGGGCCACACGAGGATCTAGAAAGTTACCTAGAAGCAATGGATCAACTGAGAAGCATTGTTCATTTTTTCAACTGTAACAAAAGTTATAAGAGCAATGCTGGAGTGCTTAATCATGTCAATAACTTACTTGCAAAAGCTAACTTAAAGATAGAAGAGGAGTTTAGACAGCTCTTGACATCTTACAGCAAACCAGTGGAACCTGATCGCCTTTTTGATTGCCTCCCCCACTCTCTACGACCATCATCAGGGTCTCCTGGGCATCAGGGTGAAGCTACTGGCAAGAATCCTTCTTCTACCAATCACTCTGAGCACAACAAAAGCTTAGAAACTGCTGTTTACACTGCTCCAACTCTTATTCCACCCAGGATTCTGCCATTGCTGCACGATTTAGCCCAACAAATGAGTCAAGCTGGTCACCAACAACAACTCTACAAAATTTATAGAGAAACCCGTGCTTCAGCTTTGGAACAGAGTCTCAGGAAATTAGGTGTGGAAAAACTTACTAAAGATGATGTCCAGAAGATGCAGTGGGAAGTTTTGGAGGCTAAGATTGGAAATTGGATTCATTTCATGCGGATTGCTGTCAAATTGCTATTTTCTGGGGAAAAGAAAGTCTGTGGTCAAATATTTGATGGTGTTGATTCTCTCAGGGATCAATGTTTTGCAGAAGTTACTGCAAACAGTGTAGCTGTGCTCCTTAGTTTTGGAGATGCTATTGCCAAAAGCAAGAGGTCCCCTGAAAAATTATTTGTTCTCTTAGACATGTATGAGATAATGCGAGAACTGCATTCAGAGATTGAAACAATATTTGAAGGTCAGGCCTGTGTCGAAATGCGGGAATCTTCATTGAGTTTGACAAAGCGGCTAGCTCAGACGGCCCAAGAGACCTTTGGTGATTTTGAAGAAGCCGTAGAAAAAGATGCCACAAAAACTGCTGTTCTTGATGGAACTGTGCATCCTTTGACAAGCTATGTAATTAATTACGTGAAGTTTTTATTTGACTATCAATCGACATTAAAGCAACTCTTCCAAGAGTTTGGTGAAGGGGATGCTGATGCTCAATTAGCATCTGTGACAACACAGATTATGCTGGCTCTTCAGAATAACTTGGATGGGAAATCCAAGCAATATAAAGATCCTGCATTGACTCAATTATTTCTTATGAATAACATTCACTACATTGTCAGATCAGTGCGAAGGTCAGAAGCAAAGGATTTGTTGGGGGATGATTGGGTGCAAATACACCGAAGGATTGTACAGCAGCATGCAAACCAGTATAAGAGGGTATCTTGGGCAAAGATTCTGCAGTGTCTGTCCATTCAAGGTGCTGCTTCATCAGGTGGTGGTGGTGCGATTGCAGAAGCTGGTAGCGGCAGTGGAGTTTCAAGAGCGATGGTGAAAGACAGGTACAAGACCTTCAACATCCAGTTTGAGGAGCTTCATCAAAGGCAATCTCAATGGACAGTTCCAGACAGTGAGTTGCGAGAGTCATTGAGGCTGGCAGTTGCTGAAGTTCTCCTACCTGCCTACAGATCTTTCATTAAACGTTTTGGGCCTATGATTGAAAATGGGAAAAACCCGCATAAGTACATCAGATACACTCCTGAGGATCTTGAGCACATGCTGAGTGAATTCTTTGAGGGGAAGACCCTGAATGAACTAAAGCGGTAA 1947 0.4391 MGVPQAMQTLSERAAFTRESLQKSQTITDSMVAILGSFDHRLSALETAMRPTQIRTHSIRKAHENIDKTLKAAELILAQFDLTRKAEAKILRGPHEDLESYLEAMDQLRSIVHFFNCNKSYKSNAGVLNHVNNLLAKANLKIEEEFRQLLTSYSKPVEPDRLFDCLPHSLRPSSGSPGHQGEATGKNPSSTNHSEHNKSLETAVYTAPTLIPPRILPLLHDLAQQMSQAGHQQQLYKIYRETRASALEQSLRKLGVEKLTKDDVQKMQWEVLEAKIGNWIHFMRIAVKLLFSGEKKVCGQIFDGVDSLRDQCFAEVTANSVAVLLSFGDAIAKSKRSPEKLFVLLDMYEIMRELHSEIETIFEGQACVEMRESSLSLTKRLAQTAQETFGDFEEAVEKDATKTAVLDGTVHPLTSYVINYVKFLFDYQSTLKQLFQEFGEGDADAQLASVTTQIMLALQNNLDGKSKQYKDPALTQLFLMNNIHYIVRSVRRSEAKDLLGDDWVQIHRRIVQQHANQYKRVSWAKILQCLSIQGAASSGGGGAIAEAGSGSGVSRAMVKDRYKTFNIQFEELHQRQSQWTVPDSELRESLRLAVAEVLLPAYRSFIKRFGPMIENGKNPHKYIRYTPEDLEHMLSEFFEGKTLNELKR* 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g1016 648 MobiDBLite consensus disorder prediction 173 198 - -
Vvi8g1016 648 Gene3D Exocyst complex component Exo70 74 648 - -
Vvi8g1016 648 PANTHER EXOCYST COMPLEX PROTEIN EXO70 57 640 IPR004140 GO:0000145|GO:0006887
Vvi8g1016 648 SUPERFAMILY Cullin repeat-like 76 639 IPR016159 -
Vvi8g1016 648 MobiDBLite consensus disorder prediction 164 198 - -
Vvi8g1016 648 Pfam Exo70 exocyst complex subunit 278 636 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi8g1016 Vvi-Chr8 16398020 16406008 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi8g1016 1 648 EXO70 exocyst subunit family AT5G52340 76.389 0.0 1031
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g1016 K07195 - vvi:100258036 1240.71