Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g0975 ATGCCTTCTTCTTCTGTTACTCTGGTGTCTAAATGCACGGTTTATCCGGAACACAAGTCCACAATCAAGAGCCTGAAGCTCTCAGTTTCTGATCTTCCCATGCTATCATGCCAATACATCCAGAAGGGTGTGTTGCATACTCGCCCTCCTCTTCCCATTGACTCCCTCATCTCTCTCCTCAAACAATCTCTCTCCACCGCTCTCACTCATTTCCCACCCCTCGCTGGTCGTTTCGAAACAGATGCCGACGGCCACGTCCACATCATCTGTAACGACGCTGGCGTCGAATTCATTCATGCCAAAGCTAAGCACTTCCTTATTCGTGACCTCCTCTCCCCCGTCGACGTCCACAATTGCTTCAAACAGTTCTTCGCCTTCGATGGCCTTCTCAGTTATGCCGGCCACTTCAAGCCTTTGGCCGCTGTTCAGATCACGGAACTCGCAGACGGACTTTTCATCGGTTGCACCGTCAACCACTCCGTCACCGACGGCACCTCCTTCTGGCACTTCTTCAATACCTTCGCTGAGATGACTAAAGGAGCAAAGAAGATCAGCAGGTCACCAGATTTTAACCGGGACAACGTGTTCAATTCGCCGGTGGTGCTCAGAGTCCCAGAGGGCGGCCCAAGGCTAACGTTTTCTGGAGACGAGCCGTTGCGTGAGAGAATCTTTCGGTTCCATAGAGAAGCGATTTTAAAGCTTAAATACAGAGCCAACAACCAGATACAAAAATCCACAAATGGACAAGTTTTGGATATGGGCGAAATATTGGGAAAGAGGTCTAACGATAGTTGGAAGACCATTAACGGAGAAAATGGTATGGACAACGGCAAGAAAACGTCTGTGCTGGGGAAGCTGTTGAAGAACAATGTGTCGAAACCTCTCGATTCCGAAACCGGAATTCCCAATTCAACTGCAGAGATTTCATCGTTCCAGTCACTCTCTGCTCAACTGTGGCGTTCAGTGACACGTGCTAGAAAACTGCCCTCGTCCAGGACCACGACGTTCCGAATGGCAGTTAATTGTCGTCACCGGCTGGAGCCGAAATTGGAGGCACACTACTTCGGGAACGCGATCCAGAGCATCCCAACGGTAGCATCGGTGGGGGAACTTCTGTCTCGAGATCTGCGGTGGTGTGCGGATCTGCTGCATAAGAACGTAGTGGCACACGATGATGCTACGGTGCAGCGGGGAGTAAGGGACTGGGAGAGCAACCCTCGTTGCTTTCCACTGGGGAACTTCGACGGAGCAATGATCACAATGGGGAGCTCTCCCAGATTCCCCATGTACGACAACGATTTCGGGTGGGGAAGACCCCTGGCTGTTAGGAGCGGCAAGGCCAACAAATTTGACGGGAAGATATCGGCCTTTCCAGGGAGAGATGGGGCGGGAACGGTTGATCTGGAGGTGTGTTTGGCACCGGAAACAATGGCGGGTCTTGAGTCGGACCCTGAGTTCATGCAATACGTATCGGGAATGGTGTGA 1485 0.5172 MPSSSVTLVSKCTVYPEHKSTIKSLKLSVSDLPMLSCQYIQKGVLHTRPPLPIDSLISLLKQSLSTALTHFPPLAGRFETDADGHVHIICNDAGVEFIHAKAKHFLIRDLLSPVDVHNCFKQFFAFDGLLSYAGHFKPLAAVQITELADGLFIGCTVNHSVTDGTSFWHFFNTFAEMTKGAKKISRSPDFNRDNVFNSPVVLRVPEGGPRLTFSGDEPLRERIFRFHREAILKLKYRANNQIQKSTNGQVLDMGEILGKRSNDSWKTINGENGMDNGKKTSVLGKLLKNNVSKPLDSETGIPNSTAEISSFQSLSAQLWRSVTRARKLPSSRTTTFRMAVNCRHRLEPKLEAHYFGNAIQSIPTVASVGELLSRDLRWCADLLHKNVVAHDDATVQRGVRDWESNPRCFPLGNFDGAMITMGSSPRFPMYDNDFGWGRPLAVRSGKANKFDGKISAFPGRDGAGTVDLEVCLAPETMAGLESDPEFMQYVSGMV* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g0975 494 Gene3D - 217 485 IPR023213 -
Vvi8g0975 494 Gene3D - 6 203 IPR023213 -
Vvi8g0975 494 Pfam Transferase family 5 487 - -
Vvi8g0975 494 SUPERFAMILY CoA-dependent acyltransferases 26 180 - -
Vvi8g0975 494 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 9 488 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi8g0975 Vvi-Chr8 16006283 16007767 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi8g0975 59 481 Monolignol Biosynthesis Gene Families AT5G48930 23.256 3.06e-26 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g0975 - - vvi:100257936 999.193