Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g0931 ATGGAAAGCGGGAAAGCGCCGCATCACGATATGGGAGGAACGCCGCCGGTGGCCAATGTCTCCGGCACACACTTGCATCTGATCCACATGACCTTCTTCTGGGGCAAGAACGCTGAGATTCTCTTCTCCGGTTGGCCTGGAACAAGCTCCGGCATGTATGCTCTCGCCTTGATCTTGGTCTTTGTTGTCGCCCTGCTCCTCGAGTGGCTCTCTCGCTCAAGCCTCCTCAAACCCGGCCCACACAATGTCACCACGGGTCTCCTCCAGACGGCGTTGTACGCCATTCGCTCCGGCTTCAGTTACATGCTCATGCTCGCCGTCATGTCCTTCAACGGCGGGATTTTTCTCGCCGCCGTCGCCGGTCACGCGCTGGGTTTCTTGATTTTCGGGAGTCGGGTCTTTAAAAAAACGGGTGTGACGGCTTCAGATGAGCGGTCGGATGCCCCTTTGATGAAGTGA 459 0.573 MESGKAPHHDMGGTPPVANVSGTHLHLIHMTFFWGKNAEILFSGWPGTSSGMYALALILVFVVALLLEWLSRSSLLKPGPHNVTTGLLQTALYAIRSGFSYMLMLAVMSFNGGIFLAAVAGHALGFLIFGSRVFKKTGVTASDERSDAPLMK* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g0931 152 Pfam Ctr copper transporter family 30 72 IPR007274 GO:0005375|GO:0016020|GO:0035434
Vvi8g0931 152 Pfam Ctr copper transporter family 80 129 IPR007274 GO:0005375|GO:0016020|GO:0035434
Vvi8g0931 152 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 23 140 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi8g0931 Vvi-Chr8 15576355 15576813 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi8g0931 31 145 Inorganic Solute Cotransporters AT5G59030 61.017 2.90e-46 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g0931 K14686 - vvi:100249436 296.975