Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g0927 ATGGCTGAAGAAGTGAAGCTAATTGGGATGTGGGTAAGCTCATTTAGTCTCAGAGTAGAGATTGCTCTGAAACTGAAAGGAGTCCAGTATGAGTACATTGAAGTTGATCTCACTAACAAGAGTCCTTTGCTTCTCAAATCTAACCCTGTTCACAAGAAGGTCCCTGTGCTCTTGCACAACGGGAAGCCCATCGCGGAATCACTCGTTATCCTCGAGTACATCGACGAGACCTGGAAAGACAATCCTATCTTGCCTCAGCACCCTTACGACAGAGCCATGGCACGTTTCTGGGCCAAATACATAGATGAAAAGTGTGTGCCTGCACTGTGGAAAGCTTGTTGGTGCGAAGAGAAGGAACGAGAGAAGGCCGTGGAAGAAGCATGCGTGTGCCTGAAAACGCTAGAAAATGAGCTCAAGGATAAGAAGTTTTTTGGAGGAGAGAGTGTCGGATTTGTAGATATCGTTGCCAATTTCATAGGCTTTTGGGTTGGAGCTATTGGAGAAGCGGTTGGAGTGGAATTGCTGACAAGAGACAAATTTCCAATATTATGCAAATGGAGTGATGAGCACGTCGGGTGCCGGGTGATCAAGGAAAATCTGCCTTCCAAAGATAAGGTCGTGGCCTTTTATCGGACCCGGGTTGAAAGCGCCAGTTAA 657 0.4673 MAEEVKLIGMWVSSFSLRVEIALKLKGVQYEYIEVDLTNKSPLLLKSNPVHKKVPVLLHNGKPIAESLVILEYIDETWKDNPILPQHPYDRAMARFWAKYIDEKCVPALWKACWCEEKEREKAVEEACVCLKTLENELKDKKFFGGESVGFVDIVANFIGFWVGAIGEAVGVELLTRDKFPILCKWSDEHVGCRVIKENLPSKDKVVAFYRTRVESAS* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g0927 218 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Vvi8g0927 218 SFLD Glutathione Transferase (cytosolic) 2 215 IPR040079 -
Vvi8g0927 218 SFLD Main.3: Omega- and Tau-like 2 215 IPR045073 -
Vvi8g0927 218 FunFam Tau class glutathione S-transferase 84 218 - -
Vvi8g0927 218 FunFam Tau class glutathione S-transferase 1 86 - -
Vvi8g0927 218 Gene3D - 84 217 - -
Vvi8g0927 218 SUPERFAMILY Thioredoxin-like 5 106 IPR036249 -
Vvi8g0927 218 SUPERFAMILY GST C-terminal domain-like 76 215 IPR036282 -
Vvi8g0927 218 Gene3D Glutaredoxin 1 83 - -
Vvi8g0927 218 CDD GST_N_Tau 5 78 - -
Vvi8g0927 218 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 87 209 IPR010987 -
Vvi8g0927 218 Pfam Glutathione S-transferase, N-terminal domain 4 76 IPR004045 -
Vvi8g0927 218 Pfam Glutathione S-transferase, C-terminal domain 107 188 IPR004046 -
Vvi8g0927 218 CDD GST_C_Tau 88 213 IPR045074 GO:0004364|GO:0006749
Vvi8g0927 218 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 8 207 IPR045073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi8g0927 Vvi-Chr8 15495161 15495905 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi8g0927 3 218 Glutathione S-transferase Gene Family AT3G09270 60.550 2.69e-90 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g0927 K00799 - vvi:100264838 441.425