Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g0925 ATGGCTGAAGAAGTGAAGCTAATTGGGATGTGGGGAAGCCCATTTAGTCGCAGAGTAGAGATTGCTCTGAAACTGAAAGGAGTCCAGTATGAGTACATTGATGTTGATCTCACTAACAAGAGCCCTTTGCTTCTCAAGTCTAACCCTGTTCACAAGAAGGTCCCTGTGCTCTTGCACAACGGGAAGCCCATCGCGGAATCACTCGTTATTCTCGAGTACATCGACGAGACCTGGAAAGCCAATCCTATCTTGCCTCAGCACCCTTATGACAGAGCCATGGCACGCTTCTGGGCTAAGTACATAGATGAAAAGTGCTTGCCTGCACTGTGGAACGCTTGTTGGTGCGAAAAGAAGGACCGAGAGAAGGCCGTGGAAGAAGCAAACGTGGGCCTGGAAACGCTAGAAAATGAGCTCAAGGATAAGAAGTTCTTTGGAGGAGAGAGTATCGGATTTGTAGATATCGCTGCCAATTTCATAGGCTTTTGGGTTGGAGTTCTTGAGGAAGTGGTTGGAGTGGAATTGCTGACAATTGACAAATTTCCAATATTATGCAAATGGAGAGATGAGTACGTCGGGTGCAGTGGGATCAAGGAAAATCTGCCTTCCAAAGAAAAGCTAGGGGCCTATTTTCGGACCCGGGTTGAAAGCGCCAGTCAATCCGAATGA 666 0.4745 MAEEVKLIGMWGSPFSRRVEIALKLKGVQYEYIDVDLTNKSPLLLKSNPVHKKVPVLLHNGKPIAESLVILEYIDETWKANPILPQHPYDRAMARFWAKYIDEKCLPALWNACWCEKKDREKAVEEANVGLETLENELKDKKFFGGESIGFVDIAANFIGFWVGVLEEVVGVELLTIDKFPILCKWRDEYVGCSGIKENLPSKEKLGAYFRTRVESASQSE* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g0925 221 Coils Coil 117 137 - -
Vvi8g0925 221 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Vvi8g0925 221 Gene3D - 87 221 - -
Vvi8g0925 221 SUPERFAMILY Thioredoxin-like 5 105 IPR036249 -
Vvi8g0925 221 SUPERFAMILY GST C-terminal domain-like 76 215 IPR036282 -
Vvi8g0925 221 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 8 205 IPR045073 -
Vvi8g0925 221 CDD GST_N_Tau 5 78 - -
Vvi8g0925 221 SFLD Main.3: Omega- and Tau-like 2 218 IPR045073 -
Vvi8g0925 221 Gene3D Glutaredoxin 1 86 - -
Vvi8g0925 221 FunFam Tau class glutathione S-transferase 1 86 - -
Vvi8g0925 221 Pfam Glutathione S-transferase, N-terminal domain 4 76 IPR004045 -
Vvi8g0925 221 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 87 210 IPR010987 -
Vvi8g0925 221 FunFam Tau class glutathione S-transferase 84 220 - -
Vvi8g0925 221 CDD GST_C_Tau 88 213 IPR045074 GO:0004364|GO:0006749
Vvi8g0925 221 Pfam Glutathione S-transferase, C-terminal domain 116 190 IPR004046 -
Vvi8g0925 221 SFLD Main (cytGST) 2 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi8g0925 Vvi-Chr8 15473174 15473964 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi8g0925 3 220 Glutathione S-transferase Gene Family AT3G09270 59.545 6.18e-93 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g0925 K00799 - vvi:100247682 439.499