Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g0903 ATGTATGACACTGCCAATAAAGGGATGAGATGGGTTTATCTCTACTCATTTGTTTCCATCATTGGTGCAATGGAAGTTCTCTTTATTGTGTCGGGTTGGTGGTTTCTTTTCAGGGCACATAATGTGCCATCTTCGGTTGAAGATGGGTATGCTCCGATTTCAAGCTATTTCAGGAGATTTAGCTACACCGAACTTAAGAAGGCAACCGACAATTTCAAAGTAGAGCTTGTAAGAAGAGGCTTTGGGGCTGTTTATAAGGGTGTTTTGGAGGATGAAAGGGTAGTAGCTGTGAAGAAATTGGGAGATGAGTATCTAGAATGGGTTATCCATTGTGACGTGAGGCCTGAAAATATACTACTAGACAATGGGTTTGAACCAAAAATTGAAGATTTTGGGCTAGTAAAGCTGTCCCGAAGAGGTGGCCTTGGTTCAGGAGAATTCTCTCGGGTTCCGGGGACTAAAGGGTACATGGCTCCAGAGTGGGCTATGAATCTTCCAATTACGGCAAAAGTTGATGCTTATAGCTATGGAGTTGCGGTTCTAGAGATGGTGAGGGGAATTTGGCTTTCAAACTGGGTGGGTGGGGATGGTGAGGAGCAGGAAGCTGAGCTGACGAGGTTTGCCAGGCTAGTGAAACGGAAAATTCAATGTGGAGAAGACAATTGGATAGAGGATACATTGGACCCAAGATCGAAGGGGAAGTTTAGCAGGCAGCAGGCAATCGAAATAGGTATTTCTTGTGTGGAGGAAGAGAGAAGTAAAAGACCAACAATGGCCACCGTAGTCCAAGTTCTACTGGAATGTGAAGATGAAGCCCAAGTAGACTTGGAGTAA 834 0.446 MYDTANKGMRWVYLYSFVSIIGAMEVLFIVSGWWFLFRAHNVPSSVEDGYAPISSYFRRFSYTELKKATDNFKVELVRRGFGAVYKGVLEDERVVAVKKLGDEYLEWVIHCDVRPENILLDNGFEPKIEDFGLVKLSRRGGLGSGEFSRVPGTKGYMAPEWAMNLPITAKVDAYSYGVAVLEMVRGIWLSNWVGGDGEEQEAELTRFARLVKRKIQCGEDNWIEDTLDPRSKGKFSRQQAIEIGISCVEEERSKRPTMATVVQVLLECEDEAQVDLE* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g0903 277 SMART serkin_6 71 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi8g0903 277 PANTHER OS07G0415500 PROTEIN 9 102 - -
Vvi8g0903 277 ProSitePatterns Tyrosine protein kinases specific active-site signature. 108 120 IPR008266 GO:0004672|GO:0006468
Vvi8g0903 277 Gene3D Phosphorylase Kinase; domain 1 45 105 - -
Vvi8g0903 277 Pfam Protein kinase domain 107 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi8g0903 277 SUPERFAMILY Protein kinase-like (PK-like) 58 269 IPR011009 -
Vvi8g0903 277 ProSiteProfiles Protein kinase domain profile. 1 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi8g0903 277 Gene3D Transferase(Phosphotransferase) domain 1 106 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi8g0903 Vvi-Chr8 15304865 15306380 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi8g0903 108 265 Receptor kinase-like Gene Family AT4G21410 41.566 9.56e-25 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Vvi8g0903 Pkinase 1.2e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g0903 - - vvi:100244235 306.219