Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g0900 ATGGGAAACCTATTTTCCTCCATTCTTCTCATCCTTCTTATCTCTTTCTTCTTCTCTTTTACAACTTCCAAAACCCAGAACTTTTTGCAAAGAGGCTCCTCTCTCTCTGTCGAAGATGATTCGGACGACTACATCACCTCCCCAGACAAATCATTCACTTGTGGTTTCTATGGGATGGGGGAAAATGCTTACTGGTTTTCAATATGGTTCACAAATTCGAAGGAAAGAACTGTTGTTTGGATGGCCAATCGAAATAGACCTGTCAATGGCCGGGGCTCCAGAATTTCGCTGCAGAGAGATGGCACCATGATGCTAAGGGATGCTGATGGCTCAACTGTTTGGGAGACTAACACTACCTCTACCGATGTTGATCGAGCAGAGCTTTTGGACACTGGAAACCTTGTTCTCAAGGACCCACGAGGTAAAATTCTGTGGCAAAGCTTTGATTTTCCAACTGATACTCTTCTGCCAAACCAAATCTTTACCACGAGCACAAAGCTGATCTCTATTCTCAGAAGAGGGGATTTTTCTTCTGGTTACTTTAACTTCCTTTTTGACAATGATAATGTCTTGAGAATGATGTATGATGGGCCTGAGATTTCAAGCTTGTATTGGCCTAATCCTGATTGGGATGTTTTCCAAAATGGAAGAACAAACTATAACAGTAGCAGAATTGCTGTTTTAGATGAAATGGGGAGGTTTCTTTCGAGTGATCAAATGTCTTTCAAAGCTTCTGACATGGGTTTTGGATGTAAAGTGCATGGGCTATGTGGTAGAAATGGGATTTGTATTTATACACCAGAACCCAAGGGTTCATGTCCTCCGGGCTATGAAGTAAGTGACCCAAGTGACTGGAGCAAAGGTTGCAAGTCTAAGTTCAACCAAAGCTGTTCCCAAACACAGCAGGTAAAATTTGTGGAGCTTCCCCAGACCGATTACTATGGGTTTGATCTCAATTACAGCCAATCTGTTTCAATGGAAGCTTGCAGGAAAATCTGCTTGGACGATTGCCTTTGCCAAGGATTCGCCTACAGGCTAACAGGAGAAGGGAACTGTTACGCAAAAAGTACCCTTTTCAATGGCTACAAGTCCTCCAACTTCCCTGGGAGTTTATATTTAAAACTGCCTGTGGATGTCGAAACGTCAGCACCCACTGTCCTTAATGGTTCTGATCTCATATGCGAGTCCAAGGAGGTTGAGGTTGTGCACAGTTCTTCTGTGTATGACACTGCCAGTAAAAAGATGAGATGGGTTTATCTCTACTCATTTGCTTCTGCCATTGGTGCCATAGTAGTTCTCTTTATTGTGTCAGGTTGGTGGTTTCTTTTCAGGGTACATAATGTGCCATCTTCAGCTGAAGATGGATATGGTCCGATATCAAGCCCGTTCAGGAGATTTAGCTACACCGAACTCAAGAAGGCAACCAACAATTTCAAAGTGGAGCTTGGAAGAGGAGGCTTTGGGGCTGTTTATAAGGGTGTTTTGGTGGATGAAAGGGCAGTAGCAGTGAAGAAATTGGGAGATTCCACTCAAGGGGAAGGGGAGTTTTGGGCTGAAGTAAGCACAATCGGAAAAATCTATCACATGAACCTAGTCAGAATGTGGGGATTCTGTTCAGAGGGTAGACACAGACTTGTAGTCTACGAGCATGTAGAAAATCTGTCACTGGATAAGCATCTCTTCAGCACGAGTTGTCTGGGATGGAAAGAGAGGTTTAACGTTGCAGTGGGGACAGCGAGGGGTTTAGCCTACCTTCACCATGAGTGTCTAGAATGGGTTATCCACTGTGACGTGAAGCCTGAAAATATACTTCTAGACAATGGGTTTGAACCAAAGATTGCAGATTTTGTGCTAGCCAAGCTGTCTCAGAGAGGTGGCCCCGGTTCAGGAGAATTCTCTCGGATTCGGGGGACTAAAGGGTACATGGCTCCAGAGTGGGCTATGAATCTTCCAATTACGGCAAAAGTTGATGTTTATTGCTATGGAGTTGTGGTTTTAGAGATGGTGAGGGGAATTCGGCTTTCGAAATGGGTGGGTGAGGATGGCGAGGAGCAGGAAGCTGAGCTTACGAGGTTTGTCAGGGTAGTGAAAAGGAAAATTCAATATGGAGAAGACAATTGGGTAGAGGATACAGTGGACCCAAGATTGAAGGGGAAGTTTAGCAGGCAGCAGGCAGCCATGTTGGTCGAAATAGGTATTTCTTGTGTGGAGGAAGATAGAAGTAAACGACCAACAATGGCCACCGTAGTGCAAGTTCTACTGGAATGTGATGCCCAAGTCCAAACCCTGGACTTGGAGTAA 2301 0.4455 MGNLFSSILLILLISFFFSFTTSKTQNFLQRGSSLSVEDDSDDYITSPDKSFTCGFYGMGENAYWFSIWFTNSKERTVVWMANRNRPVNGRGSRISLQRDGTMMLRDADGSTVWETNTTSTDVDRAELLDTGNLVLKDPRGKILWQSFDFPTDTLLPNQIFTTSTKLISILRRGDFSSGYFNFLFDNDNVLRMMYDGPEISSLYWPNPDWDVFQNGRTNYNSSRIAVLDEMGRFLSSDQMSFKASDMGFGCKVHGLCGRNGICIYTPEPKGSCPPGYEVSDPSDWSKGCKSKFNQSCSQTQQVKFVELPQTDYYGFDLNYSQSVSMEACRKICLDDCLCQGFAYRLTGEGNCYAKSTLFNGYKSSNFPGSLYLKLPVDVETSAPTVLNGSDLICESKEVEVVHSSSVYDTASKKMRWVYLYSFASAIGAIVVLFIVSGWWFLFRVHNVPSSAEDGYGPISSPFRRFSYTELKKATNNFKVELGRGGFGAVYKGVLVDERAVAVKKLGDSTQGEGEFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLVVYEHVENLSLDKHLFSTSCLGWKERFNVAVGTARGLAYLHHECLEWVIHCDVKPENILLDNGFEPKIADFVLAKLSQRGGPGSGEFSRIRGTKGYMAPEWAMNLPITAKVDVYCYGVVVLEMVRGIRLSKWVGEDGEEQEAELTRFVRVVKRKIQYGEDNWVEDTVDPRLKGKFSRQQAAMLVEIGISCVEEDRSKRPTMATVVQVLLECDAQVQTLDLE* 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g0900 766 Pfam PAN-like domain 301 354 IPR003609 -
Vvi8g0900 766 FunFam Serine/threonine-protein kinase 551 761 - -
Vvi8g0900 766 Gene3D Phosphorylase Kinase; domain 1 447 550 - -
Vvi8g0900 766 PANTHER OS07G0415500 PROTEIN 251 755 - -
Vvi8g0900 766 FunFam S-receptor-like serine/threonine-protein kinase 446 550 - -
Vvi8g0900 766 Pfam D-mannose binding lectin 77 164 IPR001480 -
Vvi8g0900 766 SUPERFAMILY alpha-D-mannose-specific plant lectins 64 210 IPR036426 -
Vvi8g0900 766 SMART ntp_6 300 375 IPR003609 -
Vvi8g0900 766 CDD B_lectin 41 151 IPR001480 -
Vvi8g0900 766 Gene3D Transferase(Phosphotransferase) domain 1 551 764 - -
Vvi8g0900 766 Gene3D Hepatocyte Growth Factor 307 369 - -
Vvi8g0900 766 FunFam Serine/threonine-protein kinase 26 149 - -
Vvi8g0900 766 SMART serkin_6 476 760 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi8g0900 766 ProSiteProfiles Bulb-type lectin domain profile. 20 149 IPR001480 -
Vvi8g0900 766 FunFam Serine/threonine-protein kinase 305 384 - -
Vvi8g0900 766 ProSiteProfiles PAN/Apple domain profile. 297 377 IPR003609 -
Vvi8g0900 766 CDD PAN_AP_plant 293 376 - -
Vvi8g0900 766 ProSitePatterns Protein kinases ATP-binding region signature. 482 505 IPR017441 GO:0005524
Vvi8g0900 766 ProSitePatterns Serine/Threonine protein kinases active-site signature. 593 605 IPR008271 GO:0004672|GO:0006468
Vvi8g0900 766 PIRSF SRK 235 764 IPR024171 GO:0004674
Vvi8g0900 766 PIRSF SRK 2 247 IPR024171 GO:0004674
Vvi8g0900 766 Gene3D - 21 150 IPR036426 -
Vvi8g0900 766 SMART blect_4 36 151 IPR001480 -
Vvi8g0900 766 SUPERFAMILY Protein kinase-like (PK-like) 458 753 IPR011009 -
Vvi8g0900 766 ProSiteProfiles Protein kinase domain profile. 476 754 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi8g0900 766 Pfam Protein kinase domain 479 751 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi8g0900 Vvi-Chr8 15283826 15286231 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi8g0900 466 753 Trihelix Transcription Factor Family AT5G38560 43.003 2.07e-63 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Vvi8g0900 Pkinase 2.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g0900 - - vvi:100249399 1478.38