Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g0899 ATGGGAAACCTATTTTCCTCCTTTCTTCTCATCCTTCTTATCTCTTTCTTCTTCTCTTTTACAACTTCCAAAACCCAGAACTTTTTGCAAAGAGGCTCCTCTCTCTCTGTCGAAGATGATTCGGACGACTACATCACCTCCCCAGACAAATCATTCACTTGTGGTTTCTATGGGATGGGGGAAAATGCTTACTGGTTTTCAATATGGTTCACAAATTCAAAGGAAAGAACTGTTGTTTGGATGGCCAATCGAAATAGACCTGTCAATGGCCGGGGCTCCAGAATTTCGCTGCAGAGAGATGGCACCATGATGCTAAGGGATGCTGATGGCTCAACTGTTTGGGAGACTAACACTACCTCTACTGATGTTGATCGAGCAGAGCTTTTGGACACTGGAAACCTTGTTCTCAAGGACCCACGAGGTAAAATTCTGTGGCAAAGCTTTGGTTTTCCAACTGATACTCTTCTGCCAAACCAAATCTTTACCACGAGCACAAAGCTGATCTCTATACTCAGAAGAGGGGATTTTTCTTCTGGTTACTTTAACTTCCTTTTTGACAATGACAATGTCTTGAGAATGATGTATGATGGGCCTGAGATTTCCAGATTGTATTGGCCTAATCCTGATTGGGATGTTTTCGGAAATGGAAGAACAAACTTTAACAGTAGTAGAACTGCTGTTTTGGATGAAATGGGGAGGTTTCTTTCGAGTGATAAAATGTCTTTCAACGCTTCTGACATGGGTTTTGGAGTCAAAAGGAGGCTGACAATGGACTACGATGGAAACCTGAGGCTCTATAGTTTAAACCATTCCACGGGATTATGGGTGATCTCATGGAAAGCTCTTAGCGAACAGTGTAAAGTACACGGGTTATGTGGTAGAAATGGGATTTGTATTTATACACCAGAACCCAAGTGTTCATGTCCTCCGGGCTATGAAGTAAGTGACCCAAGTGACTGGAGCAAAGGTTGCAAGTCTAAGTTCAACCAAAGCTGTTCCCAAACACAGCAGGTAAAATTTTTGGAGCTTCCCCAGACCGATTACTATGGGTTTGATCTCAATTACAGCCAATCTGTTTCAATGGAAGCTTGCAGGAAAATCTGCTTGGACGATTGCCTTTGCCAAGGATTCGCCTACAGGCTAACAGGAGAAGGGAACTGTTACGCAAAAAGTACCCTTTTCAATGGCTACAAGTCCTCCAACTTCCCTGGGAGTTTATATTTAAAACTGCCTGTGGATATCGAAACGTCAGCACCCACTGTCCTCAATGGTTCTGATCTCATATGCGAGTCCAAGGAGGTTGAGGTTGTGCACAGTTCTTCTGTATATGACACTGCCAGTAAAAAGATGAGATGGGTTTATCTCTACTCATTTGCTTCTGCCATTGGTGCCATAGAAGTTCTCTTTATTGTGTCAGGTTGGTGGTTTCTTTTCAAGGTACATAATGTGCCATCTTCAGCTGAAGATGGATATGGTTCGATATCAAGCCCGTTCAGGAGATTTAGCTACACCGAACTCAAGAAGGCAACCAACAATTTCAAAGTGGAGCTTGGAAGAGGAGGCTTTGGGGCTGTTTATAAGGGTGTTTTGGAGGATGAAAGGGCAGTAGCAGTGAAGAAATTGGGAGATGCCACTCAAGGGGAAGGGGAGTTTTGGGCTGAAGTAAGCACAATCGGAAAAATCTATCACATGAACCTAGTCAGAATGTGGGGATTCTGTTCAGAGGGTAGACACAGACTTGTAGTCTACGAGCATGTAGAAAATCTGTCACTGGATAAGCATCTCTTCAGCACGAGTTGTCTGGGATGGAAAGAGAGGTTTAACGTTGCAGTGGGGACAGCGAGGGGTTTAGCCTACCTTCACCATGAGTGTCTAGAATGGGTTATCCACTGTGACGTGAAGCCTGAAAATATACTTCTAGACAACGGGTTTGAACCAAAGATTGCAGATTTTGGGCTAGCCAAGCTGTCTCAGAGAGGTGGCCCCGGTTCAGGAGAATTCTCTCGGATTCGGGGGACTAAAGGGTACATGGCTCCAGAGTGGGCTATGAATCTTCCAATTACGGCAAAAGTTGATGTTTATAGCTATGGAGTTGTGGTTTTAGAGATGGTGAGGGGAATTCGGCTTTCGAAATGGGTGGGTGAGGATGGCGAGGAGCAGGAAGCTGAGCTGACGAGGTTTGTCAGGGCAGTGAAAAGGAAAATTCAATATGGAGAAGACAATTGGGTAGAGGATACAGTGGACCCAAGATTGAAGGGGAAGTTTAGTAGGCAGCAGGCAACAATGTTGGTCGAAATAGGTATTTCTTGTGTGGAGGAAGATAGAAGTAAAAGACCAACAATGGCCACCGTAGTCCAAGTTCTACTGGAATGCGAAGGTGAAGCCCAAGTCCAAACCTTGGACTTGGAGTAA 2412 0.4449 MGNLFSSFLLILLISFFFSFTTSKTQNFLQRGSSLSVEDDSDDYITSPDKSFTCGFYGMGENAYWFSIWFTNSKERTVVWMANRNRPVNGRGSRISLQRDGTMMLRDADGSTVWETNTTSTDVDRAELLDTGNLVLKDPRGKILWQSFGFPTDTLLPNQIFTTSTKLISILRRGDFSSGYFNFLFDNDNVLRMMYDGPEISRLYWPNPDWDVFGNGRTNFNSSRTAVLDEMGRFLSSDKMSFNASDMGFGVKRRLTMDYDGNLRLYSLNHSTGLWVISWKALSEQCKVHGLCGRNGICIYTPEPKCSCPPGYEVSDPSDWSKGCKSKFNQSCSQTQQVKFLELPQTDYYGFDLNYSQSVSMEACRKICLDDCLCQGFAYRLTGEGNCYAKSTLFNGYKSSNFPGSLYLKLPVDIETSAPTVLNGSDLICESKEVEVVHSSSVYDTASKKMRWVYLYSFASAIGAIEVLFIVSGWWFLFKVHNVPSSAEDGYGSISSPFRRFSYTELKKATNNFKVELGRGGFGAVYKGVLEDERAVAVKKLGDATQGEGEFWAEVSTIGKIYHMNLVRMWGFCSEGRHRLVVYEHVENLSLDKHLFSTSCLGWKERFNVAVGTARGLAYLHHECLEWVIHCDVKPENILLDNGFEPKIADFGLAKLSQRGGPGSGEFSRIRGTKGYMAPEWAMNLPITAKVDVYSYGVVVLEMVRGIRLSKWVGEDGEEQEAELTRFVRAVKRKIQYGEDNWVEDTVDPRLKGKFSRQQATMLVEIGISCVEEDRSKRPTMATVVQVLLECEGEAQVQTLDLE* 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g0899 803 Pfam Protein kinase domain 514 786 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi8g0899 803 FunFam S-receptor-like serine/threonine-protein kinase 481 585 - -
Vvi8g0899 803 ProSiteProfiles Protein kinase domain profile. 511 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi8g0899 803 Gene3D - 21 149 IPR036426 -
Vvi8g0899 803 CDD EGF 286 313 - -
Vvi8g0899 803 SMART serkin_6 511 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi8g0899 803 Pfam D-mannose binding lectin 77 164 IPR001480 -
Vvi8g0899 803 PANTHER OS07G0415500 PROTEIN 5 790 - -
Vvi8g0899 803 Gene3D Transferase(Phosphotransferase) domain 1 586 801 - -
Vvi8g0899 803 SMART blect_4 36 151 IPR001480 -
Vvi8g0899 803 ProSitePatterns Serine/Threonine protein kinases active-site signature. 628 640 IPR008271 GO:0004672|GO:0006468
Vvi8g0899 803 CDD B_lectin 41 151 IPR001480 -
Vvi8g0899 803 ProSitePatterns Protein kinases ATP-binding region signature. 517 540 IPR017441 GO:0005524
Vvi8g0899 803 SMART ntp_6 335 410 IPR003609 -
Vvi8g0899 803 ProSiteProfiles Bulb-type lectin domain profile. 20 149 IPR001480 -
Vvi8g0899 803 ProSiteProfiles EGF-like domain profile. 282 318 IPR000742 -
Vvi8g0899 803 FunFam Serine/threonine-protein kinase 26 149 - -
Vvi8g0899 803 FunFam Serine/threonine-protein kinase 340 419 - -
Vvi8g0899 803 CDD PAN_AP_plant 328 411 - -
Vvi8g0899 803 Pfam S-locus glycoprotein domain 251 313 IPR000858 GO:0048544
Vvi8g0899 803 CDD STKc_IRAK 517 790 - -
Vvi8g0899 803 SUPERFAMILY Protein kinase-like (PK-like) 494 786 IPR011009 -
Vvi8g0899 803 ProSiteProfiles PAN/Apple domain profile. 332 412 IPR003609 -
Vvi8g0899 803 PIRSF SRK 2 801 IPR024171 GO:0004674
Vvi8g0899 803 Gene3D Hepatocyte Growth Factor 342 404 - -
Vvi8g0899 803 Gene3D Phosphorylase Kinase; domain 1 480 585 - -
Vvi8g0899 803 SUPERFAMILY alpha-D-mannose-specific plant lectins 64 210 IPR036426 -
Vvi8g0899 803 Pfam PAN-like domain 337 389 IPR003609 -
Vvi8g0899 803 FunFam Serine/threonine-protein kinase 586 796 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi8g0899 Vvi-Chr8 15277500 15279911 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi8g0899 501 792 Trihelix Transcription Factor Family AT5G38560 43.434 1.07e-65 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Vvi8g0899 Pkinase 2.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g0899 - - vvi:100249399 1618.21