Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g0893 ATGGCGTGCTGCATTAATTTTCCTCTCCGGTGTCAGTTCGATGGGCCGATTTTATCGCCTACATGTAAACCTCAAAGCATTCGAATTCATCAAGTTCCCCAAATGATTTCGTATTCCAACCATCGGCGCCGTTGCCTTATTACGGCCATGTCTCAGACGACGTCGGATAATAGGTCCCTTCCGGACGAGAAAATGCTAGTTTTTGTTCCTCCGCATCCCTTGATCAAGCACTGGGTTTCAGTTCTCAGAAATGAGCAAACCCCTTGCCCCATTTTTCGAAATGCAATGGCTGAGTTGGGAAGGCTACTCATGTATGAAGCCTCAAGGGATTGGTTGCCTACTGTCAAGGGGGAGATTCAGTCACCAATGGGGGTTGCTTCTGTTGAATTTATTGATCCAAGGGAGCCTGTGGCGGTCGTTCCAATTCTGAGAGCTGGTCTTGCTCTTATGGAATATGCATCATCAATCTTGCCAGCAACCAAAACATACCATCTAGGGATAAGCAGAGATGAGGAGACACTTCAGCCAACAATATATTTGAATAAGTTACCTGACAAATTTCCTGAAGGGTCTCGAGTTTTTTTGGTAGATCCTATGTTGGCAACAGGTGGCACTATAGTGGCGGCTCTGGACCTCGTAAAGGAACGTGGAATTAACATCAAGCAAATTAAAGTGATATCTGCTGTAGCTGCTCCTCCGGCCCTTCAGAAGCTCAGTGAGAAGTTCCCTGGGCTTCATATATACACAGGAATCATTGATCCAACTGTCAATGATAAAGGGTTTATAATTCCTGGACTTGGAGACGCTGGAGACCGTAGTTTTGGTACATGA 831 0.4573 MACCINFPLRCQFDGPILSPTCKPQSIRIHQVPQMISYSNHRRRCLITAMSQTTSDNRSLPDEKMLVFVPPHPLIKHWVSVLRNEQTPCPIFRNAMAELGRLLMYEASRDWLPTVKGEIQSPMGVASVEFIDPREPVAVVPILRAGLALMEYASSILPATKTYHLGISRDEETLQPTIYLNKLPDKFPEGSRVFLVDPMLATGGTIVAALDLVKERGINIKQIKVISAVAAPPALQKLSEKFPGLHIYTGIIDPTVNDKGFIIPGLGDAGDRSFGT* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g0893 276 Gene3D - 56 276 IPR029057 -
Vvi8g0893 276 Pfam Uracil phosphoribosyltransferase 69 276 - -
Vvi8g0893 276 NCBIfam uracil phosphoribosyltransferase 70 276 IPR005765 GO:0004845|GO:0006223
Vvi8g0893 276 SUPERFAMILY PRTase-like 67 275 IPR029057 -
Vvi8g0893 276 FunFam Uracil phosphoribosyltransferase 64 276 - -
Vvi8g0893 276 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 68 253 - -
Vvi8g0893 276 CDD PRTases_typeI 132 252 IPR000836 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi8g0893 Vvi-Chr8 15204311 15222542 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi8g0893 1 276 PRT Gene Family AT3G53900 65.292 1.17e-135 383
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g0893 K00761 - vvi:100261300 559.296