Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g0866 ATGGCCACTTCTCTCACGATCTTACTTGCTATTGTTTTTCTCCTTTCAACCCCAGTTACATCCCAGGTGGATGAGATCTTCTATGGTGGATTCAGTGATGTTGGTGCCAACCTAACCAAAACCGGAGTTGCAGAGATTGACAAGGATGGTATTCTTCGATTGACAAACGAGACCAGTAGATTAATGGGTCATGCTTTTCACTCCTTTCCTCTTCAGTTCAAGAACTCCACCAATGGAACCGCTTTCTCTTTCTCTACCTCCTTCGCTTTCGCCATCGTTCCCGAGTATCCCAAGCTTGGCGGCCATGGCTTCGCTTTCGCAATTTCGCCATCTAAGGAGCTAAGAGGCGCTCTTCCCAGTCAATATCTGGGACTCCTTAATGCTAGTGATATTGGCAACTTTTCTAACCACCTCTTCGCCGTCGAATTCGACACAGTTAAGGACTTTGAGTTTGAAGACATCAACGACAACCACGTTGGCATCGACATCGACAGCTTGGAGTCCAACGCCTCTTCCCCCGCAGCCTATTACACGGATGATTCTACGCAACAAAGCATTAATCTCCAGAGTGGGAACACGATTCAGGCATGGATTGATTATGATTCAGTAGGCAATGTTCTCAATGTGACGCTCTCGCCTTCTTCTTCCAAACCCAAATTGCCAATTTTGTCTTTCCCCTTGGATCTTTCGCCAATTCTCCAAGAATTCATGTATGTTGGCTTCTCTGCCTCTACTGGTTTACTTGCCAGCTCACATTACGTCTTCGGATGGAGCTTCAAGATGAACGGAGTCGCTCGAAGCCTCGATCTATCTTCCCTACCATCCCTTCCCGAACCTAAGGAGAGGCATACTGCTCTAACAATAGGCCTTTCGGTTTCATCAGTGGTACTAGTTATATCTGCAGTCTCTATTATCATTTACATGATTAGGAAAATCAGGAACGCAGATGTCATCGAGGCATGGGAGCTCGATATTGGCCCTCATAGATTCTCCTACCAAGAACTCAAGAAAGCCACCAAAGGATTCAGAGACAAGGAGCTACTTGGGCATGGCGGATTCGGCCGAGTTTACAGAGGAACGTTGCCTAATTCCCAGACCCAAATTGCTGTCAAGCGAATTTCACATGACTCCAAACAGGGCATGCGTGAATTCGTATCCGAAATCGCTAGCATAGGTCGACTTCGCCATCGCAATCTGGTTCAGCTTCTGGGTTGGTGCCGCAGGTACGGAAACCTCATGCTCGTGTACGATTTCATGGAAAATGGCAGCTTAGATAAATTCCTTTTTGATGAACCCAAATTGATTCTTAGTTGGGAACAGAGATTCAATATCATAAAGGGCGTTGCTTCCGGACTTCTATATTTACACGAAGGTTACGAACAAGTGGTTATTCATAGAGACATTAAGGCCAGTAACGTCTTACTAGACAACGAACTGAATGGTCGAGTCGGCGACTTCGGACTTGCAAGATTATACGAACATGGCTCCAACCCAGGCACCACTAGGGTGGTGGGCACACTGGGCTATCTCGCACCAGAGCTCTCAAGAACAGGGAAGGCCACAACCAACTCCGATGTGTTTGCGTTTGGTGCTCTACTGCTTGAGGTAACATGTGGACGCAGACCCATTGAGGCTAAAGCTCTGCCTGAAGAGCTGGTTTTGGTGGATTGGGTGTGGGACAAGTGGACAGAAGGGAGGATTCTTGAAGCTGTGGACTCCACATTAACTGGCCAATACGACGAGGGCGAGGTGGTGATGGTCTTGAAATTAGGGTTGTTGTGTTCCAGCTATTCACCCACCGCACGTCCCAGCATGAGGCAGGTGGTGAGATATCTAGAGGGAGAGGTTGAGGTGCCGGCGGTCTTGAACCCCCCCTGTGCATATGATGGAGGGAAAGATGATAGCCCAGGATTCAACGATTTTGTACATTCCTATGTCTCATCTTCCTATGAGAAGGGGAGTAGTTGCTCCGTGGACAATGAAAATGTTAATGCTGGCTTTGCTTCTGTTAATGCTTCCCCCCTTTCCCTTCTCAATGGAAGGGGGACAACAGGAGGTAGCCTTGGCTCTTCTTTTTGA 2079 0.4772 MATSLTILLAIVFLLSTPVTSQVDEIFYGGFSDVGANLTKTGVAEIDKDGILRLTNETSRLMGHAFHSFPLQFKNSTNGTAFSFSTSFAFAIVPEYPKLGGHGFAFAISPSKELRGALPSQYLGLLNASDIGNFSNHLFAVEFDTVKDFEFEDINDNHVGIDIDSLESNASSPAAYYTDDSTQQSINLQSGNTIQAWIDYDSVGNVLNVTLSPSSSKPKLPILSFPLDLSPILQEFMYVGFSASTGLLASSHYVFGWSFKMNGVARSLDLSSLPSLPEPKERHTALTIGLSVSSVVLVISAVSIIIYMIRKIRNADVIEAWELDIGPHRFSYQELKKATKGFRDKELLGHGGFGRVYRGTLPNSQTQIAVKRISHDSKQGMREFVSEIASIGRLRHRNLVQLLGWCRRYGNLMLVYDFMENGSLDKFLFDEPKLILSWEQRFNIIKGVASGLLYLHEGYEQVVIHRDIKASNVLLDNELNGRVGDFGLARLYEHGSNPGTTRVVGTLGYLAPELSRTGKATTNSDVFAFGALLLEVTCGRRPIEAKALPEELVLVDWVWDKWTEGRILEAVDSTLTGQYDEGEVVMVLKLGLLCSSYSPTARPSMRQVVRYLEGEVEVPAVLNPPCAYDGGKDDSPGFNDFVHSYVSSSYEKGSSCSVDNENVNAGFASVNASPLSLLNGRGTTGGSLGSSF* 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g0866 692 CDD STKc_IRAK 348 614 - -
Vvi8g0866 692 ProSiteProfiles Protein kinase domain profile. 342 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vvi8g0866 692 FunFam Lectin-domain containing receptor kinase A4.3 327 418 - -
Vvi8g0866 692 Pfam Protein tyrosine and serine/threonine kinase 345 612 IPR001245 GO:0004672|GO:0006468
Vvi8g0866 692 ProSitePatterns Protein kinases ATP-binding region signature. 348 371 IPR017441 GO:0005524
Vvi8g0866 692 Pfam Legume lectin domain 28 273 IPR001220 GO:0030246
Vvi8g0866 692 FunFam L-type lectin-domain containing receptor kinase S.4 419 624 - -
Vvi8g0866 692 Gene3D Transferase(Phosphotransferase) domain 1 419 624 - -
Vvi8g0866 692 FunFam L-type lectin-domain containing receptor kinase S.4 22 267 - -
Vvi8g0866 692 CDD lectin_legume_LecRK_Arcelin_ConA 28 263 IPR001220 GO:0030246
Vvi8g0866 692 Gene3D - 26 262 - -
Vvi8g0866 692 Gene3D Phosphorylase Kinase; domain 1 327 418 - -
Vvi8g0866 692 SUPERFAMILY Concanavalin A-like lectins/glucanases 25 279 IPR013320 -
Vvi8g0866 692 ProSitePatterns Serine/Threonine protein kinases active-site signature. 463 475 IPR008271 GO:0004672|GO:0006468
Vvi8g0866 692 SUPERFAMILY Protein kinase-like (PK-like) 323 625 IPR011009 -
Vvi8g0866 692 PANTHER - 41 624 - -
Vvi8g0866 692 SMART serkin_6 342 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi8g0866 Vvi-Chr8 15002848 15004926 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi8g0866 1 644 Receptor kinase-like Gene Family AT3G55550 60.638 0.0 804
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Vvi8g0866 PK_Tyr_Ser-Thr 2.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g0866 - - vvi:104880167 1286.17