Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g0862 ATGGAGAGCCTCCTCTGTGATGAAATATGGCTTACCAGTCCTGTAACTCCTGACCCACCCTGTCGTGCACCCATGCAACCCAATTTCGACATTTACGCTTCTTCATTCTATACCACTAAACAAGATCGCGAGCAGGCTCTCGCTATTTGCATGCGCCAGGAGCTCAGTTACATGCCTGAACCTGAATACGCCCACCGTCTCCGGTTCGATGATATGGGAATCTCTAGGTTCAGGGTTATACAATGGATCATCAAGTCTCGTAGTCGATTGAATCTCTCTCTTGAAACAGTTTTCAGTGCTGCAAATTACCTTGATCGATTTATTTCAATGAATCAATGGCATGGTTGGAAATACTGGATGGTTGAATTACTGTCAGTTGCATGCTTATCTGTTGCTTCCAAGTTTACTGAATCCTTCACTCCTTCCTTTGACGAAATCCAGATGGAGGACCTGGAACACTCATTTGAATCAAGCACAATCCAGCGGATGGAATTGACACTACTCCAAGCACTAGGATGGCGCCTTCGCTCAACAACACCTTACACCTTTGCAGAACTTTTGTTATGGAGTATAGACTCCCTGCAGCCTTACCTTCACCAGGAGTTAATCACCCGAGTCACCGACCTGCTTCTCCATTCTCTTTCTGATTCTAAATTCCTGGACTTCAGGCCATCTGTTGTTGCTGTATCTGCGATAAGATGCTGTTCAGAAGAATTACTTTCCTCAAAATCAGATGCCAGTGTCATGACTTATCTTACTGATTTCATTCCTCCAGAACAAAAGGATGATCTAGCAAGGTGCCAAAAGATCATGGAATTAAGAATGACTGATCCACTGTACAAGATAAAAGTCTGCGGGAACTCCAAATACTGCCCTTCAAGTCCAATAACAGTGCTAACAATGAAGGGGACGAACACATGTGATTGCCACGTCAATCTCTCTGTGTCAAAGATGCAGTCAGGTTCAAACATCAATTTCAGATCAAATTTAAGGAAGCGAATGAGGGAAGGACATTGA 1017 0.4385 MESLLCDEIWLTSPVTPDPPCRAPMQPNFDIYASSFYTTKQDREQALAICMRQELSYMPEPEYAHRLRFDDMGISRFRVIQWIIKSRSRLNLSLETVFSAANYLDRFISMNQWHGWKYWMVELLSVACLSVASKFTESFTPSFDEIQMEDLEHSFESSTIQRMELTLLQALGWRLRSTTPYTFAELLLWSIDSLQPYLHQELITRVTDLLLHSLSDSKFLDFRPSVVAVSAIRCCSEELLSSKSDASVMTYLTDFIPPEQKDDLARCQKIMELRMTDPLYKIKVCGNSKYCPSSPITVLTMKGTNTCDCHVNLSVSKMQSGSNINFRSNLRKRMREGH* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g0862 338 Pfam Cyclin, N-terminal domain 51 175 IPR006671 -
Vvi8g0862 338 CDD CYCLIN_AtCycD-like_rpt2 178 271 - -
Vvi8g0862 338 Gene3D - 60 176 - -
Vvi8g0862 338 Coils Coil 327 338 - -
Vvi8g0862 338 FunFam D6-type cyclin 60 176 - -
Vvi8g0862 338 PANTHER CYCLINS 33 272 IPR039361 -
Vvi8g0862 338 Gene3D - 48 269 - -
Vvi8g0862 338 SUPERFAMILY Cyclin-like 38 175 IPR036915 -
Vvi8g0862 338 SMART cyclin_7 81 169 IPR013763 -
Vvi8g0862 338 Pfam Cyclin, C-terminal domain 179 272 IPR004367 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi8g0862 46 272 Core Cell Cycle Gene Families AT1G70210 31.579 8.41e-34 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g0862 K18813 - vvi:100263149 689.108