Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi8g0833 ATGATAATGGATCCCAGTCGTAGAGGATTCTCCAGTTCCGTCAATGGAATTCAATTGGGAAATCGACCTTTCTCCATTCTTTCGGATCACAACCTAGTTGCGGGAGCCAAATTTGAGAACTCATTGTTTGATCGCAGTTTTAGGGAGGTTCGCTACCTTAAGCCAGATCCAGCTTCTGCTAATACGGCCTCAGATGGTTTGAGCGTGAGCCCAGAGGAAGATGACTGTGATTTCTCTGATGAGGTTTTGAAGTACATAAACCAGATGCTTATGGAGGAAGACATGGAGGACCAGACTTATATGCTTCAGCAGTCATTGGATCTTCAAGCTGCTGAGAAATCCTTCTATGAAGTCCTCGGCAAGAAGTATCCTCCGTCCCCTGACCACAACCTCAGTTTTGCTGATCAAAGTTACGAGAGCCCTGATGATAATTTCCCTGGAAATAACAGTAATTATATCAGCAGTAGCGGTACCAGTAGTGGCAACTTAGCTGATAATTGCTGGATTCAGAGTCCAAGCGATTGTAATACCTCTCAGGTACAAGCATCGCCTTTTAGCTCTTCAAATAGTGTGGTTAGTACCATGGATGGGTTAGTGGACTCTCCAAATAGTACTCTTCAACTTCCTGATTTATACAATGAGAGCCAATCCGTGTGGCAGTTCCAAAAGGGGGTTGAGGAGGCTAGTAAGTTCCTTCCCTCTGGTAATGAATTGTTTTTTAATTTGGAGGTGAAAGCATCGTTACCTCAGGGGCTGAAGGGAGGGAATAACGAGGTGGTGGTCAAGTCGGAGCTAAAGGATGAGGAAGAGCACTCACCCAGTGGGTCAAGAGTGAGGAAGAATCCTCAAAGGGAGGATATCGGATTGGAAGAGGAGAGGAGTACTAAGCAGGCAGCTGTTTATACTGAATCCACTTTGAGGTCAGAAATGTTTGACATGGTGTTGCTATGTAATAGGAATAATTGCAAGCCCCATTCGTCCACACCCCATGAAGCCTTGCAAAATGAAACAAGCAGTAATTTGCAGCAGCAAAATGGGCAAGTGAAAGGATCCAATGGTGGAAAGGGCCGGGGTAAAAAACAAAGTGGGAAAAAGGAAGTGGTGGATTTGAGAACTCTTTTGATTCAGTGTGCACAAGCTGTTGCAGCGGATGATAGGAGGAGTGCAAATGAATTGCTCAAGCAGGTCAGGCAGCATTCTTCTCCTTTTGGGGATGGGAATCAAAGACTGGCTCATTGTTTTGCTGATGGTCTTGAGGCACGCTTGGCTGGTACCGGTAGCCAGATTTATAAAGGCCTTATAAGCAAGGGGAGATCTGCTGCCGATATTTTGAAAGCCTACCATCTATATGTTTCTGTATGCCCATTCAGGAAGATGTCAAATTTCTTCTCAAACAGATCAATTATGATACGAGCAGAGAAAGCAACAAGACTCCACATCATAGATTTTGGTATCCTCTATGGTTTCCAATGGCCCACCTTTATCCAACGCCTCTCATCAAGACCTGGTGGACCCCCAAAGCTGCGTATTACTGGCATAGAATTCCCCCAGCCTGGATTCCGGCCAGCAGAACGAATTGAGGAGACAGGGCGCCGCCTAGCGAATTACGCTGCAAGTTTCAATGTGCCATTTGAATACAATGCCATAGCAAAGAAATGGGAAACCATTCAACTTGAGGAACTCCAGATCGACAGGGATGAGCTGCTTGTTGTCAACTGTTTGTATCGGTTTGAGACCTTGCTTGATGAGACTGTAGCAGTGGACAGTCCAAGAAATATTGTTCTTAACATGATAAAGAAGATAAGGCCAGATATTTTCATTCAGGGGATTGTTAATGGGTCCTATAATGCCCCTTTTTTTGTTACCAGGTTTCGAGAGGCTCTGTTCCACTTCTCTGCCCAGTTTGATATGCTTGAGACTACTGTACTCCGTGAGAATTGGGAGAGGATGCTGATTGAGAGAGAGATTTTTGGGAGGGAGGCCTTGAATGTCATAGCTTGTGAAGGCTGGGAGAGAGTTGAGAGGCCAGAAACATACAAGCAGTGGCAACTCCGAAACCTAAGGGCTGGGTTTGTGCAGCTGCCTTTGAATCGGGAGACGATGAAAAGGGCAACAGAAAGGGTGACAACAAACTACCACAAAGATTTTGTGATTGATGAAGATAGCCAGTGGATGTTGCAAGGATGGAAGGGGCGAATCATCTATGCTCTTTCTGCTTGGAAACCTGCATAG 2232 0.4539 MIMDPSRRGFSSSVNGIQLGNRPFSILSDHNLVAGAKFENSLFDRSFREVRYLKPDPASANTASDGLSVSPEEDDCDFSDEVLKYINQMLMEEDMEDQTYMLQQSLDLQAAEKSFYEVLGKKYPPSPDHNLSFADQSYESPDDNFPGNNSNYISSSGTSSGNLADNCWIQSPSDCNTSQVQASPFSSSNSVVSTMDGLVDSPNSTLQLPDLYNESQSVWQFQKGVEEASKFLPSGNELFFNLEVKASLPQGLKGGNNEVVVKSELKDEEEHSPSGSRVRKNPQREDIGLEEERSTKQAAVYTESTLRSEMFDMVLLCNRNNCKPHSSTPHEALQNETSSNLQQQNGQVKGSNGGKGRGKKQSGKKEVVDLRTLLIQCAQAVAADDRRSANELLKQVRQHSSPFGDGNQRLAHCFADGLEARLAGTGSQIYKGLISKGRSAADILKAYHLYVSVCPFRKMSNFFSNRSIMIRAEKATRLHIIDFGILYGFQWPTFIQRLSSRPGGPPKLRITGIEFPQPGFRPAERIEETGRRLANYAASFNVPFEYNAIAKKWETIQLEELQIDRDELLVVNCLYRFETLLDETVAVDSPRNIVLNMIKKIRPDIFIQGIVNGSYNAPFFVTRFREALFHFSAQFDMLETTVLRENWERMLIEREIFGREALNVIACEGWERVERPETYKQWQLRNLRAGFVQLPLNRETMKRATERVTTNYHKDFVIDEDSQWMLQGWKGRIIYALSAWKPA* 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi8g0833 743 ProSiteProfiles GRAS family profile. 361 741 IPR005202 -
Vvi8g0833 743 MobiDBLite consensus disorder prediction 264 296 - -
Vvi8g0833 743 MobiDBLite consensus disorder prediction 324 351 - -
Vvi8g0833 743 MobiDBLite consensus disorder prediction 130 150 - -
Vvi8g0833 743 MobiDBLite consensus disorder prediction 324 364 - -
Vvi8g0833 743 Pfam GRAS domain family 370 741 IPR005202 -
Vvi8g0833 743 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 306 735 IPR005202 -
Vvi8g0833 743 MobiDBLite consensus disorder prediction 126 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi8g0833 Vvi-Chr8 14792851 14795082 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi8g0833 24 742 GRAS Transcription Factor Family AT2G37650 52.103 0.0 711
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Vvi8g0833 GRAS 2.6e-116 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi8g0833 - - vvi:100252795 1433.7